RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 GLRX2Q9NS18 164 aa15.82■□□□□ 0.12
NUP50-218ENST00000493456 FAM120CQ9NX05 1096 aaKnown RBP15.82■□□□□ 0.12
NUP50-218ENST00000493456 MCM8Q9UJA3 840 aa15.82■□□□□ 0.12
NUP50-218ENST00000493456 MCTS1Q9ULC4 181 aaKnown RBP15.82■□□□□ 0.12
NUP50-218ENST00000493456 RNF115Q9Y4L5 304 aa15.82■□□□□ 0.12
NUP50-218ENST00000493456 SAR1BQ9Y6B6 198 aa15.82■□□□□ 0.12
NUP50-218ENST00000493456 COQ9O75208 318 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 NME6O75414 186 aaPredicted RBP15.81■□□□□ 0.12
NUP50-218ENST00000493456 OTCP00480 354 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 SOD3P08294 240 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 RBP1P09455 135 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 DANCRP0C864 163 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 CR1P17927 2039 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 EIF1AXP47813 144 aaKnown RBP15.81■□□□□ 0.12
NUP50-218ENST00000493456 PSG6Q00889 435 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 ZNF155Q12901 538 aaPredicted RBP15.81■□□□□ 0.12
NUP50-218ENST00000493456 FAM9CQ8IZT9 166 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 ZBED6CLQ96FA7 236 aaPredicted RBP15.81■□□□□ 0.12
NUP50-218ENST00000493456 SLCO5A1Q9H2Y9 848 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 GRHL1Q9NZI5 618 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 VPS29Q9UBQ0 182 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 RNF14Q9UBS8 474 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 SNX8Q9Y5X2 465 aa15.81■□□□□ 0.12
NUP50-218ENST00000493456 IGLV3-32A0A0A0MS00 114 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 HMX2A2RU54 273 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 A8MV72 311 aaPredicted RBP15.8■□□□□ 0.12
NUP50-218ENST00000493456 EIF1AYO14602 144 aaKnown RBP15.8■□□□□ 0.12
NUP50-218ENST00000493456 SMIM24O75264 130 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 IL3P08700 152 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 HSD3B1P14060 373 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 ZNF17P17021 662 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 HSD3B2P26439 372 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 TYK2P29597 1187 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 ACVR1BP36896 505 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 MAGEA4P43358 317 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 SLC6A8P48029 635 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 CAV1Q03135 178 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 HEPACAMQ14CZ8 416 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 DECR1Q16698 335 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.8■□□□□ 0.12
NUP50-218ENST00000493456 TMEM44Q2T9K0 475 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 LETMD1Q6P1Q0 360 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 DNM1P46Q6ZS02 220 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 STEAP2Q8NFT2 490 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 OR7G2Q8NG99 324 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 RAB3IL1Q8TBN0 382 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 DUSP19Q8WTR2 217 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 EXOSC8Q96B26 276 aaKnown RBP15.8■□□□□ 0.12
NUP50-218ENST00000493456 LRTM1Q9HBL6 345 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 MRTO4Q9UKD2 239 aaKnown RBP15.8■□□□□ 0.12
NUP50-218ENST00000493456 CLEC4AQ9UMR7 237 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 NFU1Q9UMS0 254 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 SVEP1Q4LDE5 3571 aa15.8■□□□□ 0.12
NUP50-218ENST00000493456 PHF1O43189 567 aaPredicted RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 SLITRK5O94991 958 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 CD3EP07766 207 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 THBS1P07996 1170 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 RPS17P08708 135 aaKnown RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 CTAGE8P0CG41 777 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 FAM157CP0CG43 387 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 MPIP34949 423 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 CDKN1AP38936 164 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 PSMD4P55036 377 aaKnown RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 MRPS25P82663 173 aaKnown RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 ZNF844Q08AG5 666 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 CTU2Q2VPK5 515 aaKnown RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 SH2D4BQ5SQS7 431 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 LGSNQ5TDP6 509 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 CCDC25Q86WR0 208 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 CTAGE4Q8IX94 777 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 OR10D3Q8NH80 312 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 LILRB1Q8NHL6 650 aaPredicted RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 SMAP2Q8WU79 429 aaPredicted RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 HDHD5Q9BXW7 423 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 RTN4RQ9BZR6 473 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 VPS11Q9H270 941 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 ESRP2Q9H6T0 727 aaKnown RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 BARX1Q9HBU1 254 aaPredicted RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 HHATLQ9HCP6 504 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 NGBQ9NPG2 151 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 SLC35C2Q9NQQ7 365 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 FLRT3Q9NZU0 649 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 XPR1Q9UBH6 696 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 LIPT1Q9Y234 373 aa15.79■□□□□ 0.12
NUP50-218ENST00000493456 MAGED1Q9Y5V3 778 aaPredicted RBP15.79■□□□□ 0.12
NUP50-218ENST00000493456 A0A087WV62 115 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 A0A1W2PP18 115 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 CLOCKO15516 846 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 PCDH7O60245 1069 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 SYNGR4O95473 234 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 IL33O95760 270 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 IGHV4-39P01824 125 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 TUBBP07437 444 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 C17orf67Q0P5P2 114 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 CSTF3Q12996 717 aaKnown RBP15.78■□□□□ 0.12
NUP50-218ENST00000493456 NCMAPQ5T1S8 102 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 DNAJC14Q6Y2X3 702 aaPredicted RBP15.78■□□□□ 0.12
NUP50-218ENST00000493456 EXOC3L1Q86VI1 746 aa15.78■□□□□ 0.12
NUP50-218ENST00000493456 WDR75Q8IWA0 830 aaKnown RBP15.78■□□□□ 0.12
NUP50-218ENST00000493456 ADGRG7Q96K78 797 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms