RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CD5P06127 495 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 FURINP09958 794 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 C1QTNF9P0C862 333 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 JUNBP17275 347 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TSPAN8P19075 237 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 BGNP21810 368 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 BMP5P22003 454 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 FBLP22087 321 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CYLC1P35663 651 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 YAP1P46937 504 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 UQCRFS1P47985 274 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PRELPP51888 382 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ADPRHP54922 357 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 NUTF2P61970 127 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 RPS7P62081 194 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 IFITM2Q01629 132 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CDR2Q01850 454 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TEKQ02763 1124 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 MBTD1Q05BQ5 628 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SLC34A1Q06495 639 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SRSF1Q07955 248 aaKnown RBP eCLIP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 BNIP3Q12983 259 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ASAH1Q13510 395 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 LRIF1Q5T3J3 769 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 FAM46CQ5VWP2 391 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SYPL2Q5VXT5 272 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 OR52E8Q6IFG1 317 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF790Q6PG37 636 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 UQCC3Q6UW78 93 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 LINGO4Q6UY18 593 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 RBMS3Q6XE24 437 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 HFE2Q6ZVN8 426 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 MOB2Q70IA6 237 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 DET1Q7L5Y6 550 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 NT5DC3Q86UY8 548 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 RNF113BQ8IZP6 322 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SPAG16Q8N0X2 631 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PGAM4Q8N0Y7 254 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 EID3Q8N140 333 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SYS1Q8N2H4 156 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 STX19Q8N4C7 294 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 C11orf44Q8N8P7 122 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CDRT4Q8N9R6 151 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 LRRC75AQ8NAA5 344 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CHDHQ8NE62 594 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PXT1Q8NFP0 134 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 OR2AP1Q8NGE2 309 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 MAGEE2Q8TD90 523 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CLEC4CQ8WTT0 213 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PYROXD1Q8WU10 500 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PIH1D2Q8WWB5 315 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ST8SIA2Q92186 375 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SENP5Q96HI0 755 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 AJUBAQ96IF1 538 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM56Q96MV1 263 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 MDFIQ99750 246 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SLC35A5Q9BS91 424 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TMED9Q9BVK6 235 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ELOVL4Q9GZR5 314 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PORCNQ9H237 461 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PLEKHA1Q9HB21 404 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ASAH2Q9NR71 780 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 RAD18Q9NS91 495 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SLC38A7Q9NVC3 462 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 VNN3Q9NY84 501 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TREM2Q9NZC2 230 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM9Q9P0T7 183 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF282Q9UDV7 671 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 EMCNQ9ULC0 261 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PRPF19Q9UMS4 504 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ANGEL1Q9UNK9 670 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 COPS3Q9UNS2 423 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 WASF3Q9UPY6 502 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ZDHHC9Q9Y397 364 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 RNF115Q9Y4L5 304 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 YIPF1Q9Y548 306 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TIMM13Q9Y5L4 95 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM56-RWDD3S4R434 201 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 WDR81Q562E7 1941 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 VIRMAQ69YN4 1812 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 POGZQ7Z3K3 1410 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 HEG1Q9ULI3 1381 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 A0A1W2PRG6 482 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 GRID2IPA4D2P6 1211 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MBD3L5A6NJ08 208 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SAGE2PA6NJ88 616 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CCT8L1PA6NM43 557 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ZBTB42B2RXF5 422 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C9J4A7 227 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 LOC110117498-PIK3R3F6TDL0 507 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 FAM229AH3BQW9 127 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 I6L893 689 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 DSCR3O14972 297 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 LDB2O43679 373 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF623O75123 536 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PMPCBO75439 489 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 POP7O75817 140 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SC5DO75845 299 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms