RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SRP54P61011 504 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 COX10Q12887 443 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 OCLNQ16625 522 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 ENTPD8Q5MY95 495 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 LIPKQ5VXJ0 399 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 ZNF730Q6ZMV8 503 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 FAM26EQ8N5C1 309 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 NANOGP1Q8N7R0 232 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 ASCC1Q8N9N2 400 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 DIO2Q92813 273 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 FGF11Q92914 225 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 MOAP1Q96BY2 351 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 POLDIP3Q9BY77 421 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 POLR2J2Q9GZM3 115 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 MMP28Q9H239 520 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 COQ3Q9NZJ6 369 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 PIAS3Q9Y6X2 628 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 PIP5K1CO60331 668 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 LDB3O75112 727 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 SLC35G6P0C7Q6 338 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 RPS19P39019 145 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 PPP1CAP62136 330 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 EFNB1P98172 346 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 RHAGQ02094 409 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 HTR4Q13639 388 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 GNA13Q14344 377 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 DUSP5Q16690 384 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 CEP78Q5JTW2 689 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 MEDAGQ5VYS4 303 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 FRRS1Q6ZNA5 592 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 GALNT12Q8IXK2 581 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 SLC38A6Q8IZM9 456 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 LRRC25Q8N386 305 aaPredicted RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 TMEM52Q8NDY8 209 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 OR7G1Q8NGA0 311 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 OR5T3Q8NGG3 340 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 RPLP0P6Q8NHW5 317 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 TMEM203Q969S6 136 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 TM4SF19Q96DZ7 209 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 IRF2BPLQ9H1B7 796 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 STARD5Q9NSY2 213 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 EVA1BQ9NVM1 165 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 MSRAQ9UJ68 235 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 APOA1P02647 267 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 NAT1P18440 290 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 CRYBB2P43320 205 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 DEFA1P59665 94 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 DEFA3P59666 94 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 TNFRSF17Q02223 184 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 NDUFA5Q16718 116 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 OR2G6Q5TZ20 316 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 Q6ZSR6 202 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 OR4K14Q8NGD5 310 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 NT5CQ8TCD5 201 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 GAS2L1Q99501 681 aaPredicted RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 ASPNQ9BXN1 380 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 FBXO34Q9NWN3 711 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 CFL2Q9Y281 166 aa12.01□□□□□ -0.49
PRAME-213ENST00000492657 YARS2Q9Y2Z4 477 aaKnown RBP12.01□□□□□ -0.49
PRAME-213ENST00000492657 SPEGQ15772 3267 aa12□□□□□ -0.49
PRAME-213ENST00000492657 NPIPA5A0A0B4J1W7 369 aa12□□□□□ -0.49
PRAME-213ENST00000492657 ZSCAN5BA6NJL1 495 aa12□□□□□ -0.49
PRAME-213ENST00000492657 NPIPA7E9PJI5 369 aa12□□□□□ -0.49
PRAME-213ENST00000492657 NPIPA8P0DM63 369 aa12□□□□□ -0.49
PRAME-213ENST00000492657 SMIM10L1P0DMW3 83 aa12□□□□□ -0.49
PRAME-213ENST00000492657 HNRNPA2B1P22626 353 aaKnown RBP12□□□□□ -0.49
PRAME-213ENST00000492657 NDUFS1P28331 727 aa12□□□□□ -0.49
PRAME-213ENST00000492657 CD79BP40259 229 aa12□□□□□ -0.49
PRAME-213ENST00000492657 TSFMP43897 325 aaKnown RBP12□□□□□ -0.49
PRAME-213ENST00000492657 GPR4P46093 362 aa12□□□□□ -0.49
PRAME-213ENST00000492657 GAS1P54826 345 aa12□□□□□ -0.49
PRAME-213ENST00000492657 RGS8P57771 180 aaPredicted RBP12□□□□□ -0.49
PRAME-213ENST00000492657 GALK2Q01415 458 aa12□□□□□ -0.49
PRAME-213ENST00000492657 TIMM50Q3ZCQ8 353 aa12□□□□□ -0.49
PRAME-213ENST00000492657 ZFP69Q49AA0 526 aa12□□□□□ -0.49
PRAME-213ENST00000492657 TRIM48Q8IWZ4 208 aa12□□□□□ -0.49
PRAME-213ENST00000492657 TMEM255BQ8WV15 326 aa12□□□□□ -0.49
PRAME-213ENST00000492657 FAM3CQ92520 227 aa12□□□□□ -0.49
PRAME-213ENST00000492657 SMIM10Q96HG1 83 aa12□□□□□ -0.49
PRAME-213ENST00000492657 MCHR1Q99705 422 aa12□□□□□ -0.49
PRAME-213ENST00000492657 BARHL1Q9BZE3 327 aa12□□□□□ -0.49
PRAME-213ENST00000492657 CLDND1Q9NY35 253 aa12□□□□□ -0.49
PRAME-213ENST00000492657 PCOLCE2Q9UKZ9 415 aa12□□□□□ -0.49
PRAME-213ENST00000492657 H0YGG7 62 aa12□□□□□ -0.49
PRAME-213ENST00000492657 SYT5O00445 386 aa12□□□□□ -0.49
PRAME-213ENST00000492657 HCRTR1O43613 425 aa12□□□□□ -0.49
PRAME-213ENST00000492657 APBB3O95704 486 aa12□□□□□ -0.49
PRAME-213ENST00000492657 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
PRAME-213ENST00000492657 ACP2P11117 423 aa12□□□□□ -0.49
PRAME-213ENST00000492657 GNSP15586 552 aa12□□□□□ -0.49
PRAME-213ENST00000492657 SMSP52788 366 aa12□□□□□ -0.49
PRAME-213ENST00000492657 ARFIP1P53367 373 aa12□□□□□ -0.49
PRAME-213ENST00000492657 ARF3P61204 181 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms