RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SRYQ05066 204 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 PCLAFQ15004 111 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 MLC1Q15049 377 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 DECR1Q16698 335 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 LIPMQ5VYY2 423 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 TMEM107Q6UX40 140 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 APOOLQ6UXV4 268 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 CHDHQ8NE62 594 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 OR6Y1Q8NGX8 325 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 DUSP19Q8WTR2 217 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 SMPDL3BQ92485 455 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 INTS12Q96CB8 462 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 RMND5BQ96G75 393 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 MARK4Q96L34 752 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 SFXN2Q96NB2 322 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 GATA5Q9BWX5 397 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 RBM24Q9BX46 236 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 C12orf65Q9H3J6 166 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 DSN1Q9H410 356 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 RNF122Q9H9V4 155 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 Q9N2J8 555 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 MIEF1Q9NQG6 463 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 PFDN4Q9NQP4 134 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 GALNT8Q9NY28 637 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 PPP4R1LQ9P1A2 415 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 MRTO4Q9UKD2 239 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 PACSIN3Q9UKS6 424 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 RPH3AQ9Y2J0 694 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF337Q9Y3M9 751 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF175Q9Y473 711 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 OR10H1Q9Y4A9 318 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 POLR3HQ9Y535 204 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 DNAJC15Q9Y5T4 150 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 RAI1Q7Z5J4 1906 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 OR2M5A3KFT3 312 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 C7orf72A4D263 438 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 EEF1E1-BLOC1S5C9J1V9 151 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 AZIN1O14977 448 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 LSM1O15116 133 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 EEF1E1O43324 174 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 EMC8O43402 210 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 TRIM13O60858 407 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 SEC22BO75396 215 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 UTS2O95399 124 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 RAF1P04049 648 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 PRPS2P11908 318 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 NEFHP12036 1026 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 CD99P14209 185 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 NID1P14543 1247 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 SDC1P18827 310 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 IL11P20809 199 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 TBXA2RP21731 343 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 PSMA4P25789 261 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 NTSP30990 170 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 LCN1P31025 176 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 GABRA3P34903 492 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ADAM8P78325 824 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 C17orf67Q0P5P2 114 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 IMPG1Q17R60 797 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 RFTN2Q52LD8 501 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF385BQ569K4 471 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 CFAP157Q5JU67 520 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 OR2A2Q6IF42 318 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ZCCHC12Q6PEW1 402 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF474Q6S9Z5 364 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 PLXDC2Q6UX71 529 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF551Q7Z340 670 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 BTLAQ7Z6A9 289 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 MARCH3Q86UD3 253 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 KRTAP1-3Q8IUG1 177 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 C10orf107Q8IVU9 208 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 GSPT2Q8IYD1 628 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 METTL25Q8N6Q8 603 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 BANPQ8N9N5 519 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 OR4C3Q8NH37 302 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 PSMA8Q8TAA3 256 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ACTRT2Q8TDY3 377 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 EPS8L3Q8TE67 593 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 MTERF3Q96E29 417 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 REEP4Q9H6H4 257 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 LRTM1Q9HBL6 345 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 HHATLQ9HCP6 504 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 DDX18Q9NVP1 670 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 GIN1Q9NXP7 522 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 MED11Q9P086 117 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 SENP1Q9P0U3 644 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 ATP6V1HQ9UI12 483 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 DKKL1Q9UK85 242 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 TMED5Q9Y3A6 229 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 TESMINQ9Y4I5 508 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 PTGDR2Q9Y5Y4 395 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 DSCAMO60469 2012 aa7.55□□□□□ -1.2
SMARCB1-207ENST00000491967 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms