RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 KRT4P19013 534 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 ALDH3A1P30838 453 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 MPIP34949 423 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 CPA2P48052 419 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 PNLIPRP2P54317 469 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 RPL38P63173 70 aaKnown RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 ADAM8P78325 824 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 RPP38P78345 283 aaKnown RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 RCAN2Q14206 197 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 C10orf62Q5T681 223 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 PPP4R4Q6NUP7 873 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 ZNF474Q6S9Z5 364 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 GRAMD2AQ8IUY3 354 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 OR2L13Q8N349 312 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 SLC16A11Q8NCK7 471 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 OR4K17Q8NGC6 315 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 OR4C3Q8NH37 302 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 FNDC9Q8TBE3 224 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 ACMSDQ8TDX5 336 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 STARD4Q96DR4 205 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 GIMAP5Q96F15 307 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 SH3YL1Q96HL8 342 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 WFIKKN1Q96NZ8 548 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 C1orf50Q9BV19 199 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 PINK1Q9BXM7 581 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 TSPYL1Q9H0U9 437 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 CXXC4Q9H2H0 198 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 ANKZF1Q9H8Y5 726 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 CALHM2Q9HA72 323 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 DDX18Q9NVP1 670 aaKnown RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 OXSMQ9NWU1 459 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 NMRK1Q9NWW6 199 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 TAS2R9Q9NYW1 312 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 FETUBQ9UGM5 382 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 DCDC2Q9UHG0 476 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 C19orf53Q9UNZ5 99 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 CFL2Q9Y281 166 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 KCNE3Q9Y6H6 103 aa8.03□□□□□ -1.12
HDAC3-211ENST00000491581 V9GYY5 206 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 RAI1Q7Z5J4 1906 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-211ENST00000491581 SH3D21A4FU49 640 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 A8MXE2 369 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 NPIPB8E9PQR5 432 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 COPEO14579 308 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 PIP5K1BO14986 540 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 HCRTR2O43614 444 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 EPXP11678 715 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 CRHR1P34998 444 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 KRT20P35900 424 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 KIR2DL2P43627 348 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 CASP9P55211 416 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 RIPPLY3P57055 190 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 DCAF7P61962 342 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 MRPS22P82650 360 aaKnown RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 SNTA1Q13424 505 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 TSC22D1Q15714 1073 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 CD226Q15762 336 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 DUSP5Q16690 384 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 UGT3A2Q3SY77 523 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 CFAP157Q5JU67 520 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 LIPMQ5VYY2 423 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 PAMR1Q6UXH9 720 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 GGNQ86UU5 652 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 TGIF2LYQ8IUE0 185 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 CIARTQ8N365 385 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF610Q8N9Z0 462 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 C7orf57Q8NEG2 295 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 OR7A2PQ8NGA2 310 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 GOT1L1Q8NHS2 421 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 GPR151Q8TDV0 419 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 FAM222BQ8WU58 562 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 DNAJA3Q96EY1 480 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 PPP1R36Q96LQ0 422 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 FAM111AQ96PZ2 611 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 LRTM1Q9HBL6 345 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 SIRT3Q9NTG7 399 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-211ENST00000491581 GIMAP4Q9NUV9 329 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 SIRT5Q9NXA8 310 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 GIN1Q9NXP7 522 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 SH3BP4Q9P0V3 963 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 DNAJC15Q9Y5T4 150 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 AKAP6Q13023 2319 aa8.02□□□□□ -1.13
HDAC3-211ENST00000491581 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 SLC22A20A6NK97 555 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DEFB108AA8MXU0 73 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 AZIN1O14977 448 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 LSM1O15116 133 aaKnown RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PDPK1O15530 556 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 SKAP2O75563 359 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 LYPLA1O75608 230 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 RSL1D1O76021 490 aaKnown RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 OXSR1O95747 527 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 IL33O95760 270 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 ANGPTL1O95841 491 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PLAUP00749 431 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 CGAP01215 116 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms