RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RTN4RQ9BZR6 473 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 SDHAF3Q9NRP4 125 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 NTMQ9P121 344 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 RAB21Q9UL25 225 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 L3MBTL1Q9Y468 752 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 GIMAP1-GIMAP5A0A087WTJ2 511 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 ZIC3O60481 467 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 NKX2-2O95096 273 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 IGKV1D-16P01601 117 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 DDX5P17844 614 aaKnown RBP28.44■■■□□ 2.14
LDB1-204ENST00000490751 CAPN3P20807 821 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 MAP3K8P41279 467 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 ASCL1P50553 236 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 VPS26BQ4G0F5 336 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 C6orf136Q5SQH8 315 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 CDRT4Q8N9R6 151 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 C9orf106Q8NAJ2 232 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 FBXO30Q8TB52 745 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 SLC9A6Q92581 669 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 GIMAP5Q96F15 307 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 MED11Q9P086 117 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 TACC2O95359 2948 aa28.44■■■□□ 2.14
LDB1-204ENST00000490751 WDR91A4D1P6 747 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 EMC8O43402 210 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 UTS2O95399 124 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 CHMP24386 653 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 UQCRC1P31930 480 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 RPL3P39023 403 aaKnown RBP28.43■■■□□ 2.14
LDB1-204ENST00000490751 CLK3P49761 638 aaKnown RBP28.43■■■□□ 2.14
LDB1-204ENST00000490751 PTGR1Q14914 329 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 CES4AQ5XG92 561 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 ARSKQ6UWY0 536 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 MARCH3Q86UD3 253 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 EXOC3L1Q86VI1 746 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 FNDC5Q8NAU1 212 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 OR7A2PQ8NGA2 310 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 SH3GL2Q99962 352 aa28.43■■■□□ 2.14
LDB1-204ENST00000490751 POLQO75417 2590 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 SYT5O00445 386 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 LYPLA1O75608 230 aaPredicted RBP28.42■■■□□ 2.14
LDB1-204ENST00000490751 HSPA4LO95757 839 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 ACP2P11117 423 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 CTSSP25774 331 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 SNTB1Q13884 538 aaKnown RBP28.42■■■□□ 2.14
LDB1-204ENST00000490751 IL23RQ5VWK5 629 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 TUBGCP3Q96CW5 907 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 G6PC3Q9BUM1 346 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 TBL1XR1Q9BZK7 514 aa28.42■■■□□ 2.14
LDB1-204ENST00000490751 CLCA1A8K7I4 914 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 ZNF708P17019 499 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 HK1P19367 917 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 AGFG1P52594 562 aaKnown RBP28.41■■■□□ 2.14
LDB1-204ENST00000490751 DGKQP52824 942 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 CLDN18P56856 261 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 B3GALT5-AS1P59052 145 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 MLC1Q15049 377 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 GRAMD1BQ3KR37 738 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 MFSD12Q6NUT3 480 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 ADGRE4PQ86SQ3 457 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 DUSP19Q8WTR2 217 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 LRRC46Q96FV0 321 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 CENPHQ9H3R5 247 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 SSU72Q9NP77 194 aaKnown RBP28.41■■■□□ 2.14
LDB1-204ENST00000490751 SIRT3Q9NTG7 399 aaPredicted RBP28.41■■■□□ 2.14
LDB1-204ENST00000490751 PCNX3Q9H6A9 2034 aa28.41■■■□□ 2.14
LDB1-204ENST00000490751 ESPNB1AK53 854 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 ITM2AO43736 263 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 SERPINE1P05121 402 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 TMIGD3P0DMS9 266 aaPredicted RBP28.4■■■□□ 2.14
LDB1-204ENST00000490751 LAMP1P11279 417 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 PRR5P85299 388 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 CHI3L2Q15782 390 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 FBXL19-AS1Q494R0 122 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 CEP85LQ5SZL2 805 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 PLXDC2Q6UX71 529 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 GALNT10Q86SR1 603 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 SLC16A11Q8NCK7 471 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 RNASE6Q93091 150 aaKnown RBP28.4■■■□□ 2.14
LDB1-204ENST00000490751 ZBTB9Q96C00 473 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 FAM120BQ96EK7 910 aaKnown RBP28.4■■■□□ 2.14
LDB1-204ENST00000490751 C16orf58Q96GQ5 468 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 PTGES2Q9H7Z7 377 aa28.4■■■□□ 2.14
LDB1-204ENST00000490751 ZCCHC3Q9NUD5 404 aaKnown RBP28.4■■■□□ 2.14
LDB1-204ENST00000490751 A0A1W2PRB8 838 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 OPRM1P35372 400 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 GANABQ14697 944 aaKnown RBP28.39■■■□□ 2.14
LDB1-204ENST00000490751 DUSP5Q16690 384 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 CPTPQ5TA50 214 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 RAET1LQ5VY80 246 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 APOOLQ6UXV4 268 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 OTOGQ6ZRI0 2925 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 TMEM200AQ86VY9 491 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 OTUB1Q96FW1 271 aaPredicted RBP28.39■■■□□ 2.14
LDB1-204ENST00000490751 ZIM3Q96PE6 472 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 UCN2Q96RP3 112 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 TM9SF2Q99805 663 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 YIPF4Q9BSR8 244 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 ZNF395Q9H8N7 513 aaPredicted RBP28.39■■■□□ 2.14
LDB1-204ENST00000490751 CLCF1Q9UBD9 225 aa28.39■■■□□ 2.14
LDB1-204ENST00000490751 TM9SF1O15321 606 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms