RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 KCNE2Q9Y6J6 123 aa4.41□□□□□ -1.7
CSTF1-205ENST00000490539 UTP20O75691 2785 aaKnown RBP4.41□□□□□ -1.7
CSTF1-205ENST00000490539 KIF26BQ2KJY2 2108 aa4.4□□□□□ -1.7
CSTF1-205ENST00000490539 SH3PXD2BA1X283 911 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PRORSD1PA6NEY8 169 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TRIM64BA6NI03 449 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 LINC00473A8K010 186 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 A8MT66 165 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ARHGEF33A8MVX0 844 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TMEM233B4DJY2 109 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PEX12O00623 359 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SOCS2O14508 198 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF749O43361 778 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TLX3O43711 291 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TUSC2O75896 110 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 GUCA1CO95843 209 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 EIF2S1P05198 315 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 F7P08709 466 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SLC35G6P0C7Q6 338 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 FCGR1AP12314 374 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 HSD17B1P14061 328 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 FOLR1P15328 257 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ST6GAL1P15907 406 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF37AP17032 561 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CD53P19397 219 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TCN1P20061 433 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 MAGP20916 626 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF10P21506 573 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 IL10P22301 178 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 GPX3P22352 226 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ELAVL4P26378 380 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ARL1P40616 181 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ETV5P41161 510 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PTH2RP49190 550 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 MRPL19P49406 292 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CCR8P51685 355 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 AGFG1P52594 562 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CDKN2DP55273 166 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 UCP3P55916 312 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TAS2R39P59534 338 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 STX1BP61266 288 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 RPS15AP62244 130 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 DCDP81605 110 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 RELAQ04206 551 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PRDX1Q06830 199 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 RGS1Q08116 209 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TGM3Q08188 693 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 BNIP2Q12982 314 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 NAE1Q13564 534 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 NRF1Q16656 503 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZBED5Q49AG3 693 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF789Q5FWF6 425 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 MTX3Q5HYI7 312 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 COQ5Q5HYK3 327 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CDKL4Q5MAI5 379 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 HIST2H2AA3Q6FI13 130 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 LCN8Q6JVE9 175 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF549Q6P9A3 640 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 AGTRAPQ6RW13 159 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 WDR53Q7Z5U6 358 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF554Q86TJ5 538 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TRIM73Q86UV7 250 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 GPSM1Q86YR5 675 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 RAB43Q86YS6 212 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CEP97Q8IW35 865 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 KRT78Q8N1N4 520 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 FAM109AQ8N4B1 249 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SLC15A4Q8N697 577 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 RNF148Q8N7C7 305 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 BMPERQ8N8U9 685 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SMYD1Q8NB12 490 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 FAM156AQ8NDB6 213 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 VPS37AQ8NEZ2 397 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 TTLQ8NG68 377 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 OR2L3Q8NG85 312 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PPP1R35Q8TAP8 253 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF420Q8TAQ5 688 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 STAG3L4Q8TBR4 150 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 THAP4Q8WY91 577 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SARAFQ96BY9 339 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF501Q96CX3 271 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 L3HYPDHQ96EM0 354 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 MOCOSQ96EN8 888 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SLC45A3Q96JT2 553 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 LRFN5Q96NI6 719 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 IL17FQ96PD4 163 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 PKP4Q99569 1192 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 DOK1Q99704 481 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 SLC29A1Q99808 456 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 CIB1Q99828 191 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 HOPXQ9BPY8 73 aaPredicted RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 AIF1LQ9BQI0 150 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 GPATCH1Q9BRR8 931 aaKnown RBP4.4□□□□□ -1.71
CSTF1-205ENST00000490539 DPH7Q9BTV6 452 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 C9orf16Q9BUW7 83 aa4.4□□□□□ -1.71
CSTF1-205ENST00000490539 DERL2Q9GZP9 239 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms