RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF814B7Z6K7 855 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 TNFSF11O14788 317 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 GMFGO60234 142 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 PGAM1P18669 254 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 EVI2BP34910 448 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 FEN1P39748 380 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 DUSP2Q05923 314 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 SPATA6LQ8N4H0 392 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 ABHD3Q8WU67 409 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 MUCL1Q96DR8 90 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 SORCS2Q96PQ0 1159 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 LRRC1Q9BTT6 524 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 RBM4Q9BWF3 364 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 PTGES2Q9H7Z7 377 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 ANKRA2Q9H9E1 313 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 FLRT3Q9NZU0 649 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 CORO1CQ9ULV4 474 aaPredicted RBP12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 PCDHB10Q9UN67 800 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 PMF1-BGLAPU3KQ54 211 aa12.07□□□□□ -0.48
EXOSC3-207ENST00000490516 LOC390937A0A1W2PQ73 354 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 BANF1O75531 89 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 IPO7O95373 1038 aaKnown RBP12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 CT45A8P0DMV1 189 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 CT45A9P0DMV2 189 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 PCSK2P16519 638 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 KRT20P35900 424 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 ARFIP1P53367 373 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 PNLIPRP2P54317 469 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 HILS1P60008 231 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 MRPS35P82673 323 aaKnown RBP12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 LTB4RQ15722 352 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 TMEM44Q2T9K0 475 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 CT45A2Q5DJT8 189 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 TMEM201Q5SNT2 666 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 SULT1C3Q6IMI6 304 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 NPSR1Q6W5P4 371 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 RAD9BQ6WBX8 426 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 TUSC5Q8IXB3 177 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 DUSP19Q8WTR2 217 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 CERS2Q96G23 380 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 NPAS1Q99742 590 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 USB1Q9BQ65 265 aaKnown RBP12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 FKBP7Q9Y680 259 aa12.06□□□□□ -0.48
EXOSC3-207ENST00000490516 KMT2CQ8NEZ4 4911 aaKnown RBP12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 A0A0J9YW62 118 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 KRT14P02533 472 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 ATP1B1P05026 303 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 BMP4P12644 408 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 APEX1P27695 318 aaKnown RBP12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 PIK3CBP42338 1070 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 ZNF83P51522 516 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 TAS2R39P59534 338 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 GPX6P59796 221 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 GLYR1Q49A26 553 aaPredicted RBP12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 GRHL2Q6ISB3 625 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 FAM180BQ6P0A1 224 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 TMEM108Q6UXF1 575 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 NUDT13Q86X67 352 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 CD274Q9NZQ7 290 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
EXOSC3-207ENST00000490516 ADAMDEC1O15204 470 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 FADS1O60427 444 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 ALX3O95076 343 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 DHRS4L1P0CG22 281 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 CD40P25942 277 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 CDH15P55291 814 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 ACAP2Q15057 778 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 OR4D1Q15615 310 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 ZSWIM7Q19AV6 140 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 HBMQ6B0K9 141 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 GTF2IRD2BQ6EKJ0 949 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 THSD4Q6ZMP0 1018 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 GTF2IRD2Q86UP8 949 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 TDRPQ86YL5 185 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 SVOPLQ8N434 492 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 ANKS4BQ8N8V4 417 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 OR2V1Q8NHB1 315 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 RNF128Q8TEB7 428 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 INPP5KQ9BT40 448 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 CD244Q9BZW8 370 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 TMEM185BQ9H7F4 350 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 PLAC1Q9HBJ0 212 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 SDHAF3Q9NRP4 125 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms