RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NFAM1Q8NET5 270 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 OR10H4Q8NGA5 316 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 SETD7Q8WTS6 366 aaKnown RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 ERVK-6Q9BXR3 956 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 GLT8D2Q9H1C3 349 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 PNO1Q9NRX1 252 aaKnown RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 TTC26A0AVF1 554 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 ZSCAN5BA6NJL1 495 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 K7ENP7 123 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 EMC8O43402 210 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 PPIHO43447 177 aaKnown RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 ZBTB14O43829 449 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 SCRG1O75711 98 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 IGLV1-47P01700 117 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 SLC4A1P02730 911 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 TSPAN8P19075 237 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 PTPN6P29350 595 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 OAS2P29728 719 aaKnown RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 CDH5P33151 784 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 IL9RQ01113 521 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 AP1B1Q10567 949 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 KCNJ11Q14654 390 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 HERPUD1Q15011 391 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 IL17AQ16552 155 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 SLX4IPQ5VYV7 408 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 IL34Q6ZMJ4 242 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM26Q6ZUK4 368 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 TAF8Q7Z7C8 310 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 ZNF184Q99676 751 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 NACA2Q9H009 215 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 EHD1Q9H4M9 534 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 GDAP2Q9NXN4 497 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 CNOT2Q9NZN8 540 aaKnown RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 BCAP29Q9UHQ4 241 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 ZNF490Q9ULM2 529 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-206ENST00000489868 NUDCQ9Y266 331 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 GRIN2DO15399 1336 aa3.4□□□□□ -1.87
CCDC39-206ENST00000489868 SYCE3A1L190 88 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 SAGE2PA6NJ88 616 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 NDUFA7O95182 113 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 FUT3P21217 361 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 HSPA1LP34931 641 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 STARP49675 285 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 HLCSP50747 726 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 ZNF133P52736 654 aaPredicted RBP3.39□□□□□ -1.87
CCDC39-206ENST00000489868 WNT4P56705 351 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 RPL32P62910 135 aaKnown RBP3.39□□□□□ -1.87
CCDC39-206ENST00000489868 BCL2L1Q07817 233 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 PKN2Q16513 984 aaKnown RBP3.39□□□□□ -1.87
CCDC39-206ENST00000489868 CCDC14Q49A88 953 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 CYBRD1Q53TN4 286 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 OR2B11Q5JQS5 317 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 OR6B2Q6IFH4 312 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 ERI1Q8IV48 349 aaKnown RBP3.39□□□□□ -1.87
CCDC39-206ENST00000489868 BPIFB2Q8N4F0 458 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 MSANTD4Q8NCY6 345 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 ATP6V0A1Q93050 837 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 PSMG2Q969U7 264 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 TADA1Q96BN2 335 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 HAVCR1Q96D42 359 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM80Q96HE8 168 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 RPGRIP1LQ68CZ1 1315 aa3.39□□□□□ -1.87
CCDC39-206ENST00000489868 E9PLD3 99 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 HTATSF1O43719 755 aaKnown RBP3.38□□□□□ -1.87
CCDC39-206ENST00000489868 HLA-DPA1P20036 260 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 SFNP31947 248 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 ZNF154Q13106 437 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 TFDP1Q14186 410 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 Q7L0L9 218 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 DQX1Q8TE96 717 aaKnown RBP3.38□□□□□ -1.87
CCDC39-206ENST00000489868 RNF138Q8WVD3 245 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 ZNF799Q96GE5 643 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 IL4I1Q96RQ9 567 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM121Q9BTD3 319 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 XPO4Q9C0E2 1151 aaKnown RBP3.38□□□□□ -1.87
CCDC39-206ENST00000489868 THAP9Q9H5L6 903 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 GPN2Q9H9Y4 310 aaPredicted RBP3.38□□□□□ -1.87
CCDC39-206ENST00000489868 P2RX2Q9UBL9 471 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 USP16Q9Y5T5 823 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 ANKRD30BQ9BXX2 1392 aa3.38□□□□□ -1.87
CCDC39-206ENST00000489868 ARHGAP23Q9P227 1491 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 RNF222A6NCQ9 220 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 E9PMD0 336 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 SGK494L7N484 410 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 CD55P08174 381 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 MDKP21741 143 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-206ENST00000489868 RBMXP38159 391 aaKnown RBP3.37□□□□□ -1.87
CCDC39-206ENST00000489868 NUMBP49757 651 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 PPP2R5CQ13362 524 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 FRA10AC1Q70Z53 315 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 OR9A4Q8NGU2 314 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 MCHR2Q969V1 340 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 ELSPBP1Q96BH3 223 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 TBC1D10AQ9BXI6 508 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 ONECUT1Q9UBC0 465 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 SPRR3Q9UBC9 169 aa3.37□□□□□ -1.87
CCDC39-206ENST00000489868 CFAP73A6NFT4 308 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 TIMP1P01033 207 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms