RNA–Protein interactions for RNA: ENST00000489344.5

RBM3-208, Transcript of RNA binding motif protein 3, human

TSL 2

Gene RBM3, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-208	ENST00000489344	SKAP2	O75563	359 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.53	□□□□□ -0.4	2e-23	■■■□□ 19.2
RBM3-208	ENST00000489344	SNX4	O95219	450 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	TLX1	P31314	330 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	MAPK12	P53778	367 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	ERVK-8	P63133	956 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	RAE1	P78406	368 aa	Known RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	VEZF1	Q14119	521 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	KIAA0040	Q15053	153 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	RPS6KA2	Q15349	733 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	RNF111	Q6ZNA4	994 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	ZNF550	Q7Z398	422 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	TAGAP	Q8N103	731 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	WNT2B	Q93097	391 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	C11orf24	Q96F05	449 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	RBM18	Q96H35	190 aa	Known RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	FBXL20	Q96IG2	436 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	C3orf30	Q96M34	536 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	LRTM1	Q9HBL6	345 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	C1orf109	Q9NX04	203 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	TEX10	Q9NXF1	929 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	MCM8	Q9UJA3	840 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	ERVK-19	Q9WJR5	959 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	PRR14L	Q5THK1	2151 aa		12.53	□□□□□ -0.4
RBM3-208	ENST00000489344	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344		A0A1W2PNV4	684 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344		A0A1W2PR48	441 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	MSTN	O14793	375 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	LSM1	O15116	133 aa	Known RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	GUCY1B2	O75343	617 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	TNFSF13	O75888	250 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	SOX30	O94993	753 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	ACTL6A	O96019	429 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	KIT	P10721	976 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	PAX1	P15863	534 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	LOX	P28300	417 aa	Predicted RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	TIA1	P31483	386 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	GCK	P35557	465 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	CD79B	P40259	229 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	BUD31	P41223	144 aa	Predicted RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	TRA2B	P62995	288 aa	Known RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	IGLV3-21	P80748	117 aa	Predicted RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	PLIN5	Q00G26	463 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	GAB1	Q13480	694 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	EBP	Q15125	230 aa	Known RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	PDCD2	Q16342	344 aa	Predicted RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	C18orf63	Q68DL7	685 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	GALNT18	Q6P9A2	607 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	FAM76A	Q8TAV0	307 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	SPPL2A	Q8TCT8	520 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	IGFBPL1	Q8WX77	278 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	TM4SF18	Q96CE8	201 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	MARK4	Q96L34	752 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	PPP3R2	Q96LZ3	170 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	ANGPTL4	Q9BY76	406 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	CXorf56	Q9H5V9	222 aa		12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	RPF2	Q9H7B2	306 aa	Known RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	ZNF701	Q9NV72	531 aa	Predicted RBP	12.52	□□□□□ -0.41
RBM3-208	ENST00000489344	GNG14	A0A1W2PPG7	69 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CAPN14	A8MX76	684 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	SLCO1B7	G3V0H7	640 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	TLX2	O43763	284 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	PCDH7	O60245	1069 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	PEX11A	O75192	247 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	JUN	P05412	331 aa	Known RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	ANXA4	P09525	319 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CPN1	P15169	458 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	PTPN6	P29350	595 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CCKAR	P32238	428 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	TNFRSF17	Q02223	184 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	ZNF267	Q14586	743 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CLEC12B	Q2HXU8	276 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CHRFAM7A	Q494W8	412 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	GALNTL6	Q49A17	601 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	RFTN2	Q52LD8	501 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	XKR7	Q5GH72	579 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	NOXRED1	Q6NXP6	359 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	ADGRE4P	Q86SQ3	457 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	GRAMD2A	Q8IUY3	354 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	WDR75	Q8IWA0	830 aa	Known RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	PIWIL2	Q8TC59	973 aa	Known RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	TANK	Q92844	425 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	UCN3	Q969E3	161 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	TUBGCP3	Q96CW5	907 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	PPP1R36	Q96LQ0	422 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	C7orf26	Q96N11	449 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	EBPL	Q9BY08	206 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	REG4	Q9BYZ8	158 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	NUF2	Q9BZD4	464 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	WDR41	Q9HAD4	459 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	SLCO1B3	Q9NPD5	702 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	CLCF1	Q9UBD9	225 aa		12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	MARCO	Q9UEW3	520 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	POLR3H	Q9Y535	204 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-208	ENST00000489344	HDAC3	O15379	428 aa		12.5	□□□□□ -0.41
RBM3-208	ENST00000489344	CD5L	O43866	347 aa		12.5	□□□□□ -0.41
RBM3-208	ENST00000489344	PRKRA	O75569	313 aa	Known RBP	12.5	□□□□□ -0.41
RBM3-208	ENST00000489344	AIFM1	O95831	613 aa		12.5	□□□□□ -0.41
RBM3-208	ENST00000489344	ALOX15	P16050	662 aa	Predicted RBP	12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms