RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 C1GALT1C1Q96EU7 318 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 FRG2BQ96QU4 278 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 TRIM31Q9BZY9 425 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 ALG2Q9H553 416 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 NOL11Q9H8H0 719 aaKnown RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 B3GALT5Q9Y2C3 310 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 FREM1Q5H8C1 2179 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 DPRXA6NFQ7 191 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 NTN1O95631 604 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 OPN1LWP04000 364 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 SPRP35270 261 aaPredicted RBP14.42□□□□□ -0.1
USP48-210ENST00000489108 VLDLRP98155 873 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 LOXL1Q08397 574 aaPredicted RBP14.42□□□□□ -0.1
USP48-210ENST00000489108 TTC19Q6DKK2 380 aaPredicted RBP14.42□□□□□ -0.1
USP48-210ENST00000489108 FIGNL1Q6PIW4 674 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 KLHL7Q8IXQ5 586 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 OR10D3Q8NH80 312 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 RHEBL1Q8TAI7 183 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 KCTD4Q8WVF5 259 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 HDHD5Q9BXW7 423 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 TRIM2Q9C040 744 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 NGBQ9NPG2 151 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 PFDN4Q9NQP4 134 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 FBXO34Q9NWN3 711 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 CISD1Q9NZ45 108 aaKnown RBP14.42□□□□□ -0.1
USP48-210ENST00000489108 UTS2RQ9UKP6 389 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 OR10H1Q9Y4A9 318 aa14.42□□□□□ -0.1
USP48-210ENST00000489108 MALRD1Q5VYJ5 2156 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 TCRBV9S1A1TA0A576 114 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 FAM159BA6NKW6 160 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 CXCL13O43927 109 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GMFGO60234 142 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 RAMP1O60894 148 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GCM2O75603 506 aaPredicted RBP14.41□□□□□ -0.1
USP48-210ENST00000489108 FESP07332 822 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 ADH6P28332 368 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 CRABP2P29373 138 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 NUDT6P53370 316 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 PSPHP78330 225 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 DR1Q01658 176 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 BSPH1Q075Z2 132 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GALNT1Q10472 559 aaPredicted RBP14.41□□□□□ -0.1
USP48-210ENST00000489108 ERCC6LQ2NKX8 1250 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 TMEM44Q2T9K0 475 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GRTP1Q5TC63 336 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 CYB5R2Q6BCY4 276 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 MARCH3Q86UD3 253 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 DTX2Q86UW9 622 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 CTAGE3PQ8IX95 158 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 ROBO4Q8WZ75 1007 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 HSD17B8Q92506 261 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GRIP2Q9C0E4 1043 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 GLRX2Q9NS18 164 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 FARSBQ9NSD9 589 aaKnown RBP14.41□□□□□ -0.1
USP48-210ENST00000489108 XPR1Q9UBH6 696 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 MCTS1Q9ULC4 181 aaKnown RBP14.41□□□□□ -0.1
USP48-210ENST00000489108 SLC12A4Q9UP95 1085 aa14.41□□□□□ -0.1
USP48-210ENST00000489108 SVEP1Q4LDE5 3571 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 SYNGR4O95473 234 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 AGTR1P30556 359 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 CCNG1P51959 295 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 C21orf58P58505 322 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 IRF9Q00978 393 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 IFT88Q13099 833 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 NRF1Q16656 503 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 SH2D4BQ5SQS7 431 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 SFRP5Q5T4F7 317 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 C3orf62Q6ZUJ4 267 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 CENPLQ8N0S6 344 aaPredicted RBP14.4□□□□□ -0.1
USP48-210ENST00000489108 GABRG1Q8N1C3 465 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 PIWIL2Q8TC59 973 aaKnown RBP14.4□□□□□ -0.1
USP48-210ENST00000489108 ERP27Q96DN0 273 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 ADGRG7Q96K78 797 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 FAIM2Q9BWQ8 316 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 CPSF2Q9P2I0 782 aaKnown RBP14.4□□□□□ -0.1
USP48-210ENST00000489108 STOML1Q9UBI4 398 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 ABCG2Q9UNQ0 655 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 TNPO3Q9Y5L0 923 aaKnown RBP14.4□□□□□ -0.1
USP48-210ENST00000489108 SNX8Q9Y5X2 465 aa14.4□□□□□ -0.1
USP48-210ENST00000489108 ELOA3DA6NLF2 546 aaPredicted RBP14.39□□□□□ -0.11
USP48-210ENST00000489108 UBFD1O14562 309 aaKnown RBP14.39□□□□□ -0.11
USP48-210ENST00000489108 LMX1BO60663 402 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 TUBBP07437 444 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 SRD5A1P18405 259 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 IL32P24001 234 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 DSCR9P59020 149 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 IRX1P78414 480 aaPredicted RBP14.39□□□□□ -0.11
USP48-210ENST00000489108 PSG6Q00889 435 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 ELOA3BQ3SY89 546 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 CLEC2AQ6UVW9 174 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 SEZ6L2Q6UXD5 910 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 IL17RELQ6ZVW7 336 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 CYS1Q717R9 158 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 GALNT10Q86SR1 603 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 ELOA3Q8NG57 546 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 OR7G2Q8NG99 324 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms