RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 HMGN4O00479 90 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 HS6ST1O60243 411 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 UNC5CO95185 931 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 UTS2O95399 124 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 ZNF24P17028 368 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 GRAMD1BQ3KR37 738 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 ARHGAP11BQ3KRB8 267 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 KRTCAP3Q53RY4 240 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 COX20Q5RI15 118 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 DCST2Q5T1A1 773 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 HEPHL1Q6MZM0 1159 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 TNFAIP8L2Q6P589 184 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 ANGPTL8Q6UXH0 198 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 APOOLQ6UXV4 268 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 DLEU7Q6UYE1 221 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 OLIG3Q7RTU3 272 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 RETREG3Q86VR2 466 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 MSRB3Q8IXL7 192 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 TMEM251Q8N6I4 163 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 WDSUB1Q8N9V3 476 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 GALNT11Q8NCW6 608 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 OR4C3Q8NH37 302 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 PNPT1Q8TCS8 783 aaKnown RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 AURKBQ96GD4 344 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 JSRP1Q96MG2 331 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 G6PC3Q9BUM1 346 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 OSBPL11Q9BXB4 747 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 NMUR2Q9GZQ4 415 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 NSRP1Q9H0G5 558 aaKnown RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 EXD2Q9NVH0 621 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 SLC25A37Q9NYZ2 338 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
FDPS-213ENST00000489003 LEF1Q9UJU2 399 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 BOKQ9UMX3 212 aaPredicted RBP13.86□□□□□ -0.19
FDPS-213ENST00000489003 SPENQ96T58 3664 aaKnown RBP13.85□□□□□ -0.19
FDPS-213ENST00000489003 NBASA2RRP1 2371 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 TRBV5-3A0A0A0MS03 114 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 FAM166BA8MTA8 275 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 CLIC1O00299 241 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 FBP2O00757 339 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 GNB5O14775 395 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 ASNA1O43681 348 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 FCMRO60667 390 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 CCDC22O60826 627 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 KRT34O76011 436 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 AGR2O95994 175 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 TBXA2RP21731 343 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 LCN1P31025 176 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 EVI2BP34910 448 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 SLC10A1Q14973 349 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 AP1ARQ63HQ0 302 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 TIGD3Q6B0B8 471 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 MTDHQ86UE4 582 aaKnown RBP13.85□□□□□ -0.19
FDPS-213ENST00000489003 SLC22A16Q86VW1 577 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 DPP10Q8N608 796 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 ST6GALNAC3Q8NDV1 305 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 CHDHQ8NE62 594 aaPredicted RBP13.85□□□□□ -0.19
FDPS-213ENST00000489003 GPR137Q96N19 417 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 GNRHR2Q96P88 292 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 ADAM21Q9UKJ8 722 aa13.85□□□□□ -0.19
FDPS-213ENST00000489003 NPIPA5A0A0B4J1W7 369 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 C17orf51A8MQB3 221 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 NPIPA7E9PJI5 369 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 TFECO14948 347 aaPredicted RBP13.84□□□□□ -0.19
FDPS-213ENST00000489003 SNPHO15079 494 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ANGPT2O15123 496 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 OXSR1O95747 527 aaPredicted RBP13.84□□□□□ -0.19
FDPS-213ENST00000489003 NPIPA8P0DM63 369 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 MAGEA5P43359 124 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 MASP1P48740 699 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 KHKP50053 298 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 TXNL4AP83876 142 aaKnown RBP13.84□□□□□ -0.19
FDPS-213ENST00000489003 FUT5Q11128 374 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 CMPK2Q5EBM0 449 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
FDPS-213ENST00000489003 ATAD3BQ5T9A4 648 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 BNC2Q6ZN30 1099 aaPredicted RBP13.84□□□□□ -0.19
FDPS-213ENST00000489003 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 FAM109AQ8N4B1 249 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 OR1J4Q8NGS1 313 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 DUSP19Q8WTR2 217 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ROPN1LQ96C74 230 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ZNF597Q96LX8 424 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 CCT8L2Q96SF2 557 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 HOXD1Q9GZZ0 328 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ZDHHC11Q9H8X9 412 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 UBQLN4Q9NRR5 601 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ARMCX1Q9P291 453 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 SEC14L3Q9UDX4 400 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ABCG2Q9UNQ0 655 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 HRH3Q9Y5N1 445 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 GMEB1Q9Y692 573 aa13.84□□□□□ -0.19
FDPS-213ENST00000489003 ZNF407Q9C0G0 2248 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms