RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FER1L5A0AVI2 2057 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 RRP8O43159 456 aaKnown RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 KLK10O43240 276 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 EFSO43281 561 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 DYRK3O43781 588 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 HS6ST1O60243 411 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 STX11O75558 287 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 SCRG1O75711 98 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 LYNP07948 512 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 THBS1P07996 1170 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 MYF6P23409 242 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 RBMS1P29558 406 aaKnown RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 SLC5A2P31639 672 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 CCKBRP32239 447 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 CSTF2P33240 577 aaKnown RBP eCLIP11.8□□□□□ -0.52
NELFE-209ENST00000488426 RORAP35398 523 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 HMGA2P52926 109 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 POU6F2P78424 691 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 ADARB1P78563 741 aaKnown RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 RHAGQ02094 409 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 IL11RAQ14626 422 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 ZNF311Q5JNZ3 666 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 TYW3Q6IPR3 259 aaKnown RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 IGF2-ASQ6U949 168 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PPP1R3BQ86XI6 285 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PEX5LQ8IYB4 626 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 ZNF619Q8N2I2 560 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 ZNF248Q8NDW4 579 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 OR4C15Q8NGM1 316 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 GPR151Q8TDV0 419 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 CYGBQ8WWM9 190 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 VSTM2LQ96N03 204 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 UBAP1Q9NZ09 502 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PDP1Q9P0J1 537 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 PISDQ9UG56 409 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 TMEFF2Q9UIK5 374 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 SLC13A4Q9UKG4 626 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 LOXL2Q9Y4K0 774 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PIEZO2Q9H5I5 2752 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 IGLV3-12A0A075B6K2 115 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 TCRBV16S1A1N1A0A5B0 115 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 OR2W5A6NFC9 320 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 GADD45GO95257 159 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ONECUT2O95948 504 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 UBTFL6P0CB48 400 aaPredicted RBP11.79□□□□□ -0.52
NELFE-209ENST00000488426 FGF5P12034 268 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 TNNI3P19429 210 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 RPS4Y1P22090 263 aaKnown RBP11.79□□□□□ -0.52
NELFE-209ENST00000488426 PRKACGP22612 351 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 IGFBP5P24593 272 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 SSTR4P31391 388 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 GABRA3P34903 492 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 CDH12P55289 794 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 SMIM11AP58511 58 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ELAVL1Q15717 326 aaKnown RBP11.79□□□□□ -0.52
NELFE-209ENST00000488426 MINDY4Q4G0A6 757 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 MFSD4BQ5TF39 518 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 TTC23Q5W5X9 447 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 KDM4DQ6B0I6 523 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 KRT80Q6KB66 452 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 FAHD1Q6P587 224 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 AGBL5Q8NDL9 886 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 NR4A3Q92570 626 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 FBXL20Q96IG2 436 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 DHRS1Q96LJ7 313 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ARHGDIGQ99819 225 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 PSD2Q9BQI7 771 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 CNPPD1Q9BV87 410 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 TOR3AQ9H497 397 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 KLHL28Q9NXS3 571 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 KIF17Q9P2E2 1029 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 PRODH2Q9UF12 536 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ACAD8Q9UKU7 415 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ZNF232Q9UNY5 417 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ERVK-19Q9WJR5 959 aa11.79□□□□□ -0.52
NELFE-209ENST00000488426 ARRDC5A6NEK1 342 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 AGAP5A6NIR3 686 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 J3KTA2 159 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 KIAA0513O60268 411 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 FCMRO60667 390 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 EPPINO95925 133 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 IMPDH2P12268 514 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 CDH2P19022 906 aaPredicted RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 LIMS1P48059 325 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 DAPP51397 102 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PGDP52209 483 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PSG6Q00889 435 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 BLMHQ13867 455 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 LARS2Q15031 903 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 EIPR1Q53HC9 387 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms