RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 HOXD10P28358 340 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 MARCKSP29966 332 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 MAT2AP31153 395 aaKnown RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 YBEYP58557 167 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 SRP54P61011 504 aaKnown RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 OC90Q02509 493 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 AP1B1Q10567 949 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 PPP1R8Q12972 351 aaKnown RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 CBX3Q13185 183 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 EIF2B1Q14232 305 aaKnown RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 CLPPQ16740 277 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 C2orf76Q3KRA6 126 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 HIST2H2AA3Q6FI13 130 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 PEX5LQ8IYB4 626 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ZNF100Q8IYN0 542 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM185AQ8NFB2 350 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 NEIL2Q969S2 332 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 DNAJA3Q96EY1 480 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 DEFB118Q96PH6 123 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ACCSQ96QU6 501 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 NLNQ9BYT8 704 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ABCG8Q9H221 673 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 VCXQ9H320 206 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM245Q9H330 911 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 NECAP2Q9NVZ3 263 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 FAM153AQ9UHL3 310 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ENTPD4Q9Y227 616 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 MRPS2Q9Y399 296 aaKnown RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 PTPRUQ92729 1446 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TRBV6-6A0A0A6YYG2 114 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 KIR2DL5BA0A0G2JN68 375 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 KIR2DL5BA0A0G2JPC4 375 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 SYCE3A1L190 88 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM89A2RUT3 159 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TRIM64A6NGJ6 449 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TRIM64BA6NI03 449 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 DDX39AO00148 427 aaKnown RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 CHEK1O14757 476 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 HSF2BPO75031 334 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 SYNGR4O95473 234 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TIMP1P01033 207 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 GSTA1P08263 222 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 SERPINF2P08697 491 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ZCCHC18P0CG32 403 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ZNF18P17022 549 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 NPY2RP49146 381 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 CCL11P51671 97 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 HNRNPFP52597 415 aaKnown RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ARF5P84085 180 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 CCZ1BP86790 482 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 CCZ1P86791 482 aaPredicted RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 UBXN1Q04323 297 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 BTG3Q14201 252 aaPredicted RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ZNF630Q2M218 657 aaPredicted RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 DLEU7Q6UYE1 221 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ADAMTSL2Q86TH1 951 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 SLC22A16Q86VW1 577 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 PPP1R27Q86WC6 154 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 KIR2DL5AQ8N109 375 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 URGCPQ8TCY9 931 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 MGARPQ8TDB4 240 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 C18orf25Q96B23 403 aaPredicted RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 APOOQ9BUR5 198 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 TRPV6Q9H1D0 765 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 PRMT8Q9NR22 394 aaPredicted RBP2.18□□□□□ -2.06
CCDC66-221ENST00000487739 MARCH5Q9NX47 278 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ELOVL2Q9NXB9 296 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 HMG20BQ9P0W2 317 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 LHX3Q9UBR4 397 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 APPL1Q9UKG1 709 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 SMC3Q9UQE7 1217 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 CACNG2Q9Y698 323 aa2.18□□□□□ -2.06
CCDC66-221ENST00000487739 ABCC9O60706 1549 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 DHRS7CA6NNS2 312 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 USP27XA6NNY8 438 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 NME2P1O60361 137 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 ICOSLGO75144 302 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 HIST1H2AGP0C0S8 130 aaPredicted RBP2.17□□□□□ -2.06
CCDC66-221ENST00000487739 GNSP15586 552 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 HLA-DPA1P20036 260 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 COPB2P35606 906 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 CASP9P55211 416 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 OTUD4Q01804 1114 aaKnown RBP2.17□□□□□ -2.06
CCDC66-221ENST00000487739 TSTA3Q13630 321 aaPredicted RBP2.17□□□□□ -2.06
CCDC66-221ENST00000487739 CARTPTQ16568 116 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 LIPKQ5VXJ0 399 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 OR5M10Q6IEU7 315 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 CXCL17Q6UXB2 119 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 C1orf186Q6ZWK4 172 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.17□□□□□ -2.06
CCDC66-221ENST00000487739 ALLCQ8N6M5 410 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 CCNYQ8ND76 341 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 OR4F17Q8NGA8 305 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 OR52E1Q8NGJ3 308 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 DCUN1D4Q92564 292 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 ATP6V0A1Q93050 837 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 HIST1H2ACQ93077 130 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM45BQ96B21 275 aa2.17□□□□□ -2.06
CCDC66-221ENST00000487739 FGGYQ96C11 551 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms