RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CCDC197Q8NCU1 140 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 C8orf46Q8TAG6 207 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 SPPL2AQ8TCT8 520 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 RNASE8Q8TDE3 154 aaKnown RBP4.91□□□□□ -1.62
RTN4-214ENST00000486085 TAF4BQ92750 862 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 HAS2Q92819 552 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 ATOH8Q96SQ7 321 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 CBWD1Q9BRT8 395 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 NTMT1Q9BV86 223 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 CCDC94Q9BW85 323 aaPredicted RBP4.91□□□□□ -1.62
RTN4-214ENST00000486085 PINK1Q9BXM7 581 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 PRO3102Q9H379 93 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 ZDHHC6Q9H6R6 413 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 KCNK6Q9Y257 313 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 ANK1P16157 1881 aa4.91□□□□□ -1.62
RTN4-214ENST00000486085 TDRD15B5MCY1 1934 aaKnown RBP4.9□□□□□ -1.62
RTN4-214ENST00000486085 TRIM49BA6NDI0 452 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 GMNNO75496 209 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 EPOP01588 193 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 TPM3P06753 285 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 GHRP10912 638 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 ANPEPP15144 967 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 ATP6V1B1P15313 513 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 CD52P31358 61 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 RPL9P32969 192 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 UCP2P55851 309 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 PAX8Q06710 450 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 RAPSNQ13702 412 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 SNAI3Q3KNW1 292 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 C1orf220Q5T0J3 134 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 CAPN13Q6MZZ7 669 aaPredicted RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 ZNF343Q6P1L6 599 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 ECHDC2Q86YB7 292 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 OR4N5Q8IXE1 308 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 LRRC52Q8N7C0 313 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 SPC24Q8NBT2 197 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 ANKRD20A12PQ8NF67 263 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 NPRL2Q8WTW4 380 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 TOP1MTQ969P6 601 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 CFAP36Q96G28 342 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 PDLIM5Q96HC4 596 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 CABS1Q96KC9 395 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 CNOT6LQ96LI5 555 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 ALKBH3Q96Q83 286 aaPredicted RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 TNFRSF13CQ96RJ3 184 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 SSX3Q99909 188 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 TMEM175Q9BSA9 504 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 MRPL9Q9BYD2 267 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 WDR41Q9HAD4 459 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 UBQLN1Q9UMX0 589 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 PIN4Q9Y237 131 aaKnown RBP4.9□□□□□ -1.63
RTN4-214ENST00000486085 UMODL1Q5DID0 1318 aa4.9□□□□□ -1.63
RTN4-214ENST00000486085 IGLV4-3A0A075B6K6 122 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 ARHGEF33A8MVX0 844 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 GOLGA6L19H0YKK7 550 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 PIRO00625 290 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CPNE6O95741 557 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 ASS1P00966 412 aaKnown RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 CASP4P49662 377 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 FHITP49789 147 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 TNFSF10P50591 281 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CCR4P51679 360 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CRYBA2P53672 197 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 NDUFV3P56181 108 aaKnown RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 ACTN3Q08043 901 aaPredicted RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 CD300CQ08708 224 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 WASHC5Q12768 1159 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 KRT31Q15323 416 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 EPC2Q52LR7 807 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 TWF2Q6IBS0 349 aaKnown RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 NEPROQ6NW34 567 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CDHR3Q6ZTQ4 885 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 GPRIN3Q6ZVF9 776 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CBWD2Q8IUF1 395 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 NELFCDQ8IXH7 590 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 CHCHD4Q8N4Q1 142 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 PSMA8Q8TAA3 256 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 SSC4DQ8WTU2 575 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 UBTD2Q8WUN7 234 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 GAL3ST4Q96RP7 486 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 TUBGCP2Q9BSJ2 902 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 TMEM117Q9H0C3 514 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 MID1IP1Q9NPA3 183 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 SAMSN1Q9NSI8 373 aaKnown RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 DNAJC11Q9NVH1 559 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 GDAP2Q9NXN4 497 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 RBAKQ9NYW8 714 aaPredicted RBP4.89□□□□□ -1.63
RTN4-214ENST00000486085 SNX5Q9Y5X3 404 aa4.89□□□□□ -1.63
RTN4-214ENST00000486085 SMIM28A0A1B0GU29 152 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 OR5H15A6NDH6 313 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 ARL5CA6NH57 179 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 SHISA7A6NL88 538 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 LRRIQ3A6PVS8 624 aaPredicted RBP4.88□□□□□ -1.63
RTN4-214ENST00000486085 TMCO5BA8MYB1 307 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CRLF1O75462 422 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 GJB5O95377 273 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 TPM2P07951 284 aa4.88□□□□□ -1.63
RTN4-214ENST00000486085 CXCL8P10145 99 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms