RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 ELOVL7A1L3X0 281 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 TMEM200CA6NKL6 621 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 A8MVJ9 347 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 ACOT8O14734 319 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 ASNA1O43681 348 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 SLC19A2O60779 497 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 BCAS2O75934 225 aaPredicted RBP15.68■□□□□ 0.1
VIM-205ENST00000485947 BMP2P12643 396 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MC3RP41968 323 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 ACTR3P61158 418 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 RNF4P78317 190 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 RBBP4Q09028 425 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MAP4K2Q12851 820 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 FLOT2Q14254 428 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 LTB4RQ15722 352 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 CYP51A1Q16850 503 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 OPN5Q6U736 354 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 RPTNQ6XPR3 784 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 IFNEQ86WN2 208 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 GALNT12Q8IXK2 581 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 C10orf67Q8IYJ2 551 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MICU2Q8IYU8 434 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 DND1Q8IYX4 353 aaKnown RBP15.68■□□□□ 0.1
VIM-205ENST00000485947 OR2L13Q8N349 312 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 SLC15A4Q8N697 577 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 GOLM1Q8NBJ4 401 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 NUP43Q8NFH3 380 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 C16orf52Q8NHV5 167 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MIPOL1Q8TD10 442 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 ASB15Q8WXK1 588 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 CTHRC1Q96CG8 243 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 FBXL20Q96IG2 436 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MAGED4Q96JG8 741 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 HES7Q9BYE0 225 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 OR8D2Q9GZM6 311 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 DENND2DQ9H6A0 471 aaPredicted RBP15.68■□□□□ 0.1
VIM-205ENST00000485947 DDX18Q9NVP1 670 aaKnown RBP15.68■□□□□ 0.1
VIM-205ENST00000485947 HPF1Q9NWY4 346 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 MAT2BQ9NZL9 334 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 ACTR3BQ9P1U1 418 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 SNX13Q9Y5W8 968 aa15.68■□□□□ 0.1
VIM-205ENST00000485947 FBN2P35556 2912 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 GMNNO75496 209 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 OR2J2O76002 312 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 IGKV3-11P04433 115 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 AGAP20933 346 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 CRATP43155 626 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 PMP22Q01453 160 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 TP53BP2Q13625 1128 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
VIM-205ENST00000485947 FJX1Q86VR8 437 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 RNF130Q86XS8 419 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 SPPL2CQ8IUH8 684 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 CLEC4FQ8N1N0 589 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 ZFP62Q8NB50 900 aaPredicted RBP15.67■□□□□ 0.1
VIM-205ENST00000485947 FAM156AQ8NDB6 213 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 OR7G2Q8NG99 324 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 PNPT1Q8TCS8 783 aaKnown RBP15.67■□□□□ 0.1
VIM-205ENST00000485947 ZNF721Q8TF20 911 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 WDR60Q8WVS4 1066 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 KAT2AQ92830 837 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 SENP5Q96HI0 755 aaPredicted RBP15.67■□□□□ 0.1
VIM-205ENST00000485947 MS4A4EQ96PG1 132 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 TMEM38AQ9H6F2 299 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 CXorf21Q9HAI6 301 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 GPATCH2Q9NW75 528 aa15.67■□□□□ 0.1
VIM-205ENST00000485947 C19orf53Q9UNZ5 99 aaPredicted RBP15.67■□□□□ 0.1
VIM-205ENST00000485947 TRGV8A0A0C4DH27 118 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 OR6C76A6NM76 312 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 NPIPA5E9PKD4 350 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 UPK1AO00322 258 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 PEX1O43933 1283 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 COQ9O75208 318 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 TNFRSF21O75509 655 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 CLDN1O95832 211 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 GGT1P19440 569 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 PRIM2P49643 509 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 KHKP50053 298 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 DSTNP60981 165 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 MS4A2Q01362 244 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 MGAT2Q10469 447 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 VEZF1Q14119 521 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 KPNB1Q14974 876 aaKnown RBP15.66■□□□□ 0.1
VIM-205ENST00000485947 VMACQ2NL98 169 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 MTX3Q5HYI7 312 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 GCNT6Q5T4J0 391 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 C1QL3Q5VWW1 255 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 CRYBG3Q68DQ2 2970 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 LCN8Q6JVE9 175 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 ZCCHC12Q6PEW1 402 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 RTL4Q6ZR62 310 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 SZRD1Q7Z422 152 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 DHFR2Q86XF0 187 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 SLC30A8Q8IWU4 369 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 SULF2Q8IWU5 870 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 ZZZ3Q8IYH5 903 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 VWA5B2Q8N398 1253 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 PSD4Q8NDX1 1056 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 ADCY4Q8NFM4 1077 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 RIT1Q92963 219 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms