RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HPNP05981 417 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 NGFRP08138 427 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 GUSBP08236 651 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 LAMP1P11279 417 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 G6PDP11413 515 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ZNF24P17028 368 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PRPS1L1P21108 318 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 NT5EP21589 574 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PTPN6P29350 595 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PIGAP37287 484 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 RPL3P39023 403 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 MC3RP41968 323 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 DNASE1L1P49184 302 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 DIO3P55073 304 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 FBXW4P57775 412 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 RPL38P63173 70 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ALDH6A1Q02252 535 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 MAD2L1Q13257 205 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 STX3Q13277 289 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 MAPK11Q15759 364 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 IMPG1Q17R60 797 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ATP6AP1LQ52LC2 224 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PRAMEF20Q5VT98 475 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 IL23RQ5VWK5 629 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TMEM198Q66K66 360 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TIGD3Q6B0B8 471 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 APOOLQ6UXV4 268 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 GK5Q6ZS86 529 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SEM1Q6ZVN7 128 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TRILQ7L0X0 811 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ZNF551Q7Z340 670 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 DOLPP1Q86YN1 238 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 FAM9CQ8IZT9 166 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SLC34A3Q8N130 599 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 CLEC4FQ8N1N0 589 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 GHDCQ8N2G8 530 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 C10orf111Q8N326 155 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 WDSUB1Q8N9V3 476 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 FAM98AQ8NCA5 519 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 MIPOL1Q8TD10 442 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ACTRT2Q8TDY3 377 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PHF10Q8WUB8 498 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ZNF75CPQ92670 426 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 DIO2Q92813 273 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 GFM2Q969S9 779 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 EXOSC8Q96B26 276 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ATP6V1G3Q96LB4 118 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PPP1R36Q96LQ0 422 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 C7orf26Q96N11 449 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TSSK3Q96PN8 268 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TREX2Q9BQ50 279 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 G6PC3Q9BUM1 346 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 FOLH1BQ9HBA9 442 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ZFP64Q9NPA5 681 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SLCO1B3Q9NPD5 702 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SLC52A3Q9NQ40 469 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PNPOQ9NVS9 261 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 FBXO34Q9NWN3 711 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TAS2R9Q9NYW1 312 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SEC14L3Q9UDX4 400 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 TINAGQ9UJW2 476 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 GPR45Q9Y5Y3 372 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 KCNE3Q9Y6H6 103 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 CADP27708 2225 aa5.21□□□□□ -1.57
CUX1-208ENST00000485792 GXYLT2A0PJZ3 443 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 FAM166BA8MTA8 275 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 CAPN14A8MX76 684 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 NPIPA5E9PKD4 350 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 E9PLN8 166 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 NPIPB9F8W1W9 429 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 SLCO1B7G3V0H7 640 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 C19orf84I3L1E1 186 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 RNASET2O00584 256 aaKnown RBP5.21□□□□□ -1.58
CUX1-208ENST00000485792 AQP7O14520 342 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 TP53I11O14683 189 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 HDAC3O15379 428 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 LRRTM2O43300 516 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 HS6ST1O60243 411 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 DNAJA2O60884 412 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 SOX30O94993 753 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 HSPA4LO95757 839 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 IL33O95760 270 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 ACP2P11117 423 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 LCN1P31025 176 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 ALDH9A1P49189 494 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 TMED10P49755 219 aaKnown RBP5.21□□□□□ -1.58
CUX1-208ENST00000485792 NCBP2P52298 156 aaKnown RBP eCLIP5.21□□□□□ -1.58
CUX1-208ENST00000485792 GFRA1P56159 465 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 NRG3P56975 720 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 RPS26P62854 115 aaKnown RBP5.21□□□□□ -1.58
CUX1-208ENST00000485792 PPIAP62937 165 aaKnown RBP5.21□□□□□ -1.58
CUX1-208ENST00000485792 HBA1P69905 142 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 PDCD2Q16342 344 aaPredicted RBP5.21□□□□□ -1.58
CUX1-208ENST00000485792 C3AR1Q16581 482 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
CUX1-208ENST00000485792 TMEM44Q2T9K0 475 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 GALNTL6Q49A17 601 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 C1QL3Q5VWW1 255 aa5.21□□□□□ -1.58
CUX1-208ENST00000485792 ANKRD34AQ69YU3 496 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms