RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PRDX6P30041 224 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 MAP3K8P41279 467 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CASP3P42574 277 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 MEOX1P50221 254 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 MLLT10P55197 1068 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PPIAP62937 165 aaKnown RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 C17orf67Q0P5P2 114 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SLC10A1Q14973 349 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 DUSP5Q16690 384 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ARHGAP11BQ3KRB8 267 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 FLYWCH1Q4VC44 716 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 GPAT3Q53EU6 434 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 DCST2Q5T1A1 773 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 LRIF1Q5T3J3 769 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF468Q5VIY5 522 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 HIST2H2BCQ6DN03 193 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CGB2Q6NT52 195 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SLC2A7Q6PXP3 512 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 MDGA2Q7Z553 956 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ARPINQ7Z6K5 226 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 DHDDSQ86SQ9 333 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 RNF130Q86XS8 419 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 KRT73Q86Y46 540 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SLC30A8Q8IWU4 369 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PRR22Q8IZ63 422 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 EID3Q8N140 333 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CISD2Q8N5K1 135 aaKnown RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 OR2M7Q8NG81 312 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 OR52N2Q8NGI0 321 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 OR1J4Q8NGS1 313 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 FAM110BQ8TC76 370 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 BCAS4Q8TDM0 211 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ZFP90Q8TF47 636 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 NUDT8Q8WV74 236 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 FAR1Q8WVX9 515 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PIK3R3Q92569 461 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CDS1Q92903 461 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ROPN1LQ96C74 230 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 GIMAP5Q96F15 307 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 JSRP1Q96MG2 331 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 TRNT1Q96Q11 434 aaKnown RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 HOPXQ9BPY8 73 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 INPP5KQ9BT40 448 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 THUMPD3Q9BV44 507 aaKnown RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SPATA5L1Q9BVQ7 753 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SPATA9Q9BWV2 254 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 OSBPL11Q9BXB4 747 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 NMUR2Q9GZQ4 415 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 OR51I1Q9H343 314 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF385DQ9H6B1 395 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 MTHFD2LQ9H903 347 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SERHLQ9NQF3 203 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 NDE1Q9NXR1 346 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 QPCTLQ9NXS2 382 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 DTX4Q9Y2E6 619 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PCDHB14Q9Y5E9 798 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CHCHD2Q9Y6H1 151 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PCSK5Q92824 1860 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 RELNP78509 3460 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 GXYLT2A0PJZ3 443 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 ASPDHA6ND91 283 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 MRASO14807 208 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 NDUFB5O43674 189 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 ICOSLGO75144 302 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SERPINB7O75635 380 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SORBS2O94875 1100 aaKnown RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 UTS2O95399 124 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 OR12D1P0DN82 309 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 CCL3P10147 92 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 ACP2P11117 423 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 EDN3P14138 238 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 UQCRBP14927 111 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SLC6A2P23975 617 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 MSX1P28360 303 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 EVI2BP34910 448 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SOX18P35713 384 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 UQCRFS1P47985 274 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 CD97P48960 835 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 MAN2A2P49641 1150 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 CRISP3P54108 245 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 ATP12AP54707 1039 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 DSTNP60981 165 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 GANABQ14697 944 aaKnown RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 TOMM20Q15388 145 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SF3B4Q15427 424 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF630Q2M218 657 aaPredicted RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 HYAL4Q2M3T9 481 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 TRMT5Q32P41 509 aaKnown RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 GCNT6Q5T4J0 391 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 PRAMEF8Q5VWM4 474 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 PRAMEF7Q5VXH5 474 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 TIGD3Q6B0B8 471 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 TNFAIP8L2Q6P589 184 aaPredicted RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 FIGNL1Q6PIW4 674 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 LYPD8Q6UX82 237 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 NPSR1Q6W5P4 371 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
SF3A1-208ENST00000485618 SNX32Q86XE0 403 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 PEX5LQ8IYB4 626 aa7.58□□□□□ -1.2
SF3A1-208ENST00000485618 FAM109AQ8N4B1 249 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms