RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 HMGCLL1Q8TB92 370 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 FAM45AQ8TCE6 357 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 NEU4Q8WWR8 484 aaPredicted RBP5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 LCN9Q8WX39 176 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 IFT81Q8WYA0 676 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 RNF183Q96D59 192 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 NXPE2Q96DL1 559 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 VPS39Q96JC1 886 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 C9orf72Q96LT7 481 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 RUFY1Q96T51 708 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 CYTH2Q99418 400 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 INPP5KQ9BT40 448 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 ABHD6Q9BV23 337 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 KATNB1Q9BVA0 655 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 TRIM4Q9C037 500 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 CHRNA10Q9GZZ6 450 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 SRMSQ9H3Y6 488 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 RHOJQ9H4E5 214 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 POPDC3Q9HBV1 291 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 ZNF304Q9HCX3 659 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 FBXO6Q9NRD1 293 aaPredicted RBP5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 TRMT6Q9UJA5 497 aaKnown RBP5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 ERVK-11Q9UQG0 969 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 IKBKGQ9Y6K9 419 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 SPG11Q96JI7 2443 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 BOD1L1Q8NFC6 3051 aa5.2□□□□□ -1.58
NHLRC3-205ENST00000485407 A0A096LPK6 155 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 IGHV5-10-1A0A0J9YXX1 117 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TLCD2A6NGC4 264 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 C2orf74A8MZ97 194 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 K7EPI3 171 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 MPPED1O15442 326 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 RRP8O43159 456 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 NOL3O60936 208 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 NIPSNAP2O75323 286 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 PSIP1O75475 530 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 C1orf105O95561 183 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 C1QAP02745 245 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CATP04040 527 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 C8GP07360 202 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 HEXBP07686 556 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ABHD2P08910 425 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TFPIP10646 304 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SRD5A1P18405 259 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ITGB6P18564 788 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TFEBP19484 476 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ITIH1P19827 911 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CD82P27701 267 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 RBMS1P29558 406 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CSTF2P33240 577 aaKnown RBP eCLIP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SPRP35270 261 aaPredicted RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SLC26A3P40879 764 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 FOLR3P41439 243 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 KHKP50053 298 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CASP9P55211 416 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 GPX6P59796 221 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 HTD2P86397 168 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 VWC2Q2TAL6 325 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 KLHL38Q2WGJ6 581 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 FAM98BQ52LJ0 330 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SGO1Q5FBB7 561 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ACSBG2Q5FVE4 666 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 HECTD2Q5U5R9 776 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 NKAIN2Q5VXU1 208 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 HEPHL1Q6MZM0 1159 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CYHR1Q6ZMK1 362 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TRMT10CQ7L0Y3 403 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ADCK1Q86TW2 530 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TRIM73Q86UV7 250 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 VRK3Q8IV63 474 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TIGD4Q8IY51 512 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 KRT222Q8N1A0 295 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 OR4E2Q8NGC2 313 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 OR52E1Q8NGJ3 308 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 LKAAEAR1Q8TD35 194 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 CD200R1Q8TD46 325 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TRPC4APQ8TEL6 797 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 NAT14Q8WUY8 206 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ROBO4Q8WZ75 1007 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SPSB1Q96BD6 273 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 MSI2Q96DH6 328 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 MED8Q96G25 268 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ATXN7L3BQ96GX2 97 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 RBM18Q96H35 190 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ZNF578Q96N58 590 aaPredicted RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 FCRL4Q96PJ5 515 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 GPR21Q99679 349 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ZPBPQ9BS86 351 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 PCGF1Q9BSM1 259 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TBC1D10AQ9BXI6 508 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 PIGMQ9H3S5 423 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ACTR5Q9H9F9 607 aaPredicted RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 RDH14Q9HBH5 336 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 FBXO8Q9NRD0 319 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 HRASLS2Q9NWW9 162 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 GAR1Q9NY12 217 aaKnown RBP5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 ASIC5Q9NY37 505 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 TAS2R3Q9NYW6 316 aa5.19□□□□□ -1.58
NHLRC3-205ENST00000485407 SPATA7Q9P0W8 599 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms