RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 H3BML4 177 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 TNFRSF21O75509 655 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 PSMG1O95456 288 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 IL33O95760 270 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 GSTA1P08263 222 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 INHBBP09529 407 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 NTSP30990 170 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 CCKARP32238 428 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 EEFSECP57772 596 aaKnown RBP17.33■□□□□ 0.36
COL27A1-205ENST00000485397 SHEQ5VZ18 495 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 OR2L13Q8N349 312 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 FNDC9Q8TBE3 224 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 MZB1Q8WU39 189 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 ELP4Q96EB1 424 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 C1GALT1C1Q96EU7 318 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 AMDHD1Q96NU7 426 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 PTGES2Q9H7Z7 377 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 TNFRSF12AQ9NP84 129 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 MYNNQ9NPC7 610 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 FAM120CQ9NX05 1096 aaKnown RBP17.33■□□□□ 0.36
COL27A1-205ENST00000485397 TBK1Q9UHD2 729 aa17.33■□□□□ 0.36
COL27A1-205ENST00000485397 GXYLT2A0PJZ3 443 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 SHISA8B8ZZ34 492 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 GMFGO60234 142 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 SLITRK5O94991 958 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 CGAP01215 116 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 POU2F1P14859 743 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 ADSLP30566 484 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-205ENST00000485397 PCYT1AP49585 367 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 SLC29A2Q14542 456 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 GANABQ14697 944 aaKnown RBP17.32■□□□□ 0.36
COL27A1-205ENST00000485397 PON3Q15166 354 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF550Q7Z398 422 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF610Q8N9Z0 462 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 PIK3IP1Q96FE7 263 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 LMF2Q9BU23 707 aaKnown RBP17.32■□□□□ 0.36
COL27A1-205ENST00000485397 MED18Q9BUE0 208 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 RNF122Q9H9V4 155 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 PSMC3IPQ9P2W1 217 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-205ENST00000485397 DCDC2Q9UHG0 476 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 VPS13CQ709C8 3753 aa17.32■□□□□ 0.36
COL27A1-205ENST00000485397 A0A1W2PPM1 405 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 EMC8O43402 210 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 UTS2O95399 124 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 IGKV1D-16P01601 117 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 FAM153BP0C7A2 387 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 MYL2P10916 166 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 CRYGSP22914 178 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 GABRA3P34903 492 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 UGT2B10P36537 528 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 KCNJ5P48544 419 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZNHIT3Q15649 155 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 FAM153CQ494X1 144 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 NOXRED1Q6NXP6 359 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 APOOLQ6UXV4 268 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZYG11AQ6WRX3 759 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF551Q7Z340 670 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 TRIM46Q7Z4K8 759 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZC3HAV1LQ96H79 300 aaKnown RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 EGLN2Q96KS0 407 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 PIGQQ9BRB3 760 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 SLC39A3Q9BRY0 314 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ELOVL5Q9NYP7 299 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF226Q9NYT6 803 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 MRTO4Q9UKD2 239 aaKnown RBP17.31■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF175Q9Y473 711 aa17.31■□□□□ 0.36
COL27A1-205ENST00000485397 LINC01387J3KSC0 135 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 CRCPO75575 148 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 RSL1D1O76021 490 aaKnown RBP17.3■□□□□ 0.36
COL27A1-205ENST00000485397 AQP8O94778 261 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 ANGPTL1O95841 491 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 GRAMD1BQ3KR37 738 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 Q5PR19 223 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 ANKRD34AQ69YU3 496 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 CLEC9AQ6UXN8 241 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 C22orf34Q6ZV56 151 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 P3H2Q8IVL5 708 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 METTL25Q8N6Q8 603 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 FAM76AQ8TAV0 307 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 PIK3R3Q92569 461 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 CCDC126Q96EE4 140 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 HS3ST6Q96QI5 342 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 TBL1XR1Q9BZK7 514 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 UBTD1Q9HAC8 227 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 EQTNQ9NQ60 294 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
COL27A1-205ENST00000485397 WBP11Q9Y2W2 641 aaKnown RBP17.3■□□□□ 0.36
COL27A1-205ENST00000485397 CCL27Q9Y4X3 112 aa17.3■□□□□ 0.36
COL27A1-205ENST00000485397 NIPBLQ6KC79 2804 aaeCLIP17.3■□□□□ 0.36
COL27A1-205ENST00000485397 C16orf97H3BN30 126 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 ARHGEF9O43307 516 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 SMPD2O60906 423 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PROCP04070 461 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 CD8BP10966 210 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
COL27A1-205ENST00000485397 RPS3AP61247 264 aaKnown RBP17.29■□□□□ 0.36
COL27A1-205ENST00000485397 C17orf67Q0P5P2 114 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 HSPB3Q12988 150 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms