RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
SCFD1-206ENST00000484733 MED11Q9P086 117 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 SLC28A1O00337 649 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 EMC8O43402 210 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 SCO2O43819 266 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 PLIN3O60664 434 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-206ENST00000484733 HOXC12P31275 282 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 CRHR1P34998 444 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 KIR2DL2P43627 348 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-206ENST00000484733 PRR5P85299 388 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 TMEM44Q2T9K0 475 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 TDRPQ86YL5 185 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 METTL25Q8N6Q8 603 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 KIF18AQ8NI77 898 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 C1GALT1C1Q96EU7 318 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 PIP5K1AQ99755 562 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 NEUROD4Q9HD90 331 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 OXSMQ9NWU1 459 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 FLRT3Q9NZU0 649 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 NTMQ9P121 344 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 EIF3LQ9Y262 564 aaKnown RBP10.34□□□□□ -0.75
SCFD1-206ENST00000484733 ZNF337Q9Y3M9 751 aa10.34□□□□□ -0.75
SCFD1-206ENST00000484733 POLR3HQ9Y535 204 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-206ENST00000484733 MPDZO75970 2070 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 MED12Q93074 2177 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 OR2M5A3KFT3 312 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 C17orf51A8MQB3 221 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CTIFO43310 598 aaKnown RBP10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CGAP01215 116 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CD8BP10966 210 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CCT5P48643 541 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 SUCLG1P53597 346 aaKnown RBP10.33□□□□□ -0.76
SCFD1-206ENST00000484733 C17orf67Q0P5P2 114 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 SHEQ5VZ18 495 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 BTLAQ7Z6A9 289 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 DUSP19Q8WTR2 217 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 PGM2Q96G03 612 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 RTN4RQ9BZR6 473 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 RNF122Q9H9V4 155 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 TBK1Q9UHD2 729 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 DIAPH2O60879 1101 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CRCPO75575 148 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 NKX2-2O95096 273 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 UTS2O95399 124 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 NGFRP08138 427 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 PRPS2P11908 318 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 LCN1P31025 176 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 FRKP42685 505 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-206ENST00000484733 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CFAP157Q5JU67 520 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 SH2D4BQ5SQS7 431 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 RAET1LQ5VY80 246 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 VWA1Q6PCB0 445 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 MARCH3Q86UD3 253 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 LRRC75A-AS1Q8N1F1 130 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CEP70Q8NHQ1 597 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 CDC26Q8NHZ8 85 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 FIG4Q92562 907 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 SLC39A3Q9BRY0 314 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 TNFRSF12AQ9NP84 129 aa10.33□□□□□ -0.76
SCFD1-206ENST00000484733 A0A087WZY1 265 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 KCNH1O95259 989 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 CPA3P15088 417 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 CRYGSP22914 178 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 GABRA3P34903 492 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 FAM27E3Q08E93 113 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ZNF474Q6S9Z5 364 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 CXorf67Q86X51 503 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 KRTAP1-3Q8IUG1 177 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 FAM110BQ8TC76 370 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ZNF845Q96IR2 970 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 WFIKKN1Q96NZ8 548 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 CCT7Q99832 543 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 IQCGQ9H095 443 aaKnown RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 C1orf109Q9NX04 203 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 MID2Q9UJV3 735 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 RGS14O43566 566 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 SEC22BO75396 215 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ANGPTL1O95841 491 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ZNF17P17021 662 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 TCEA1P23193 301 aaKnown RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 GRAMD1BQ3KR37 738 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 VPS26BQ4G0F5 336 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 LIPMQ5VYY2 423 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 BIVMQ86UB2 503 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 UBQLNLQ8IYU4 475 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 CDRT4Q8N9R6 151 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ZFP28Q8NHY6 868 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 EGLN2Q96KS0 407 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 MARK4Q96L34 752 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 TRMOQ9BU70 441 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 TBL1XR1Q9BZK7 514 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 REEP4Q9H6H4 257 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 LRTM1Q9HBL6 345 aa10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ACSS1Q9NUB1 689 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-206ENST00000484733 ZNF226Q9NYT6 803 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms