RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 TMEM107Q6UX40 140 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 C10orf107Q8IVU9 208 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 MEIOBQ8N635 442 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 C9orf106Q8NAJ2 232 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 OR6Y1Q8NGX8 325 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 ZFP28Q8NHY6 868 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 FOXC2Q99958 501 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 YIPF4Q9BSR8 244 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 TRMOQ9BU70 441 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 RBM24Q9BX46 236 aaKnown RBP10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 MED4Q9NPJ6 270 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 STOML1Q9UBI4 398 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 ST6GALNAC2Q9UJ37 374 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 FBXL2Q9UKC9 423 aa10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 RPH3AQ9Y2J0 694 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-206ENST00000484372 FAM221AA4D161 298 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CASKO14936 926 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 BIRC5O15392 142 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 PDPK1O15530 556 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 SCO2O43819 266 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 TRIM13O60858 407 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CRHP06850 196 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 IFI6P09912 130 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 ZNF708P17019 499 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 ALDH3A1P30838 453 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 STARP49675 285 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 LHX2P50458 406 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 PPP2R2AP63151 447 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CAMKMTQ7Z624 323 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 LUZP2Q86TE4 346 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CDC20BQ86Y33 519 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 OR2L13Q8N349 312 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 OR4N2Q8NGD1 307 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CEP70Q8NHQ1 597 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 NRGNQ92686 78 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 INTS12Q96CB8 462 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 ELP4Q96EB1 424 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 AMDHD1Q96NU7 426 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 TBL1XR1Q9BZK7 514 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 GLIPR2Q9H4G4 154 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 LRTM1Q9HBL6 345 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 CCM2LQ9NUG4 571 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 C1orf109Q9NX04 203 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 FAM120CQ9NX05 1096 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 NDRG3Q9UGV2 375 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 PACSIN3Q9UKS6 424 aa10.83□□□□□ -0.68
SNRNP200-206ENST00000484372 MED13LQ71F56 2210 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 UPK1AO00322 258 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 AZIN1O14977 448 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 ZIC3O60481 467 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 NME6O75414 186 aaPredicted RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 IL33O95760 270 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 PRPS2P11908 318 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 HK1P19367 917 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 TCEA1P23193 301 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 PRPH2P23942 346 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 RFX3P48380 749 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 CLDN18P56856 261 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 RPS3AP61247 264 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 ADGRE4PQ86SQ3 457 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 NUDCD3Q8IVD9 361 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 RNF138Q8WVD3 245 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 PPCDCQ96CD2 204 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 ZBED6CLQ96FA7 236 aaPredicted RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 DACH2Q96NX9 599 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 CCT7Q99832 543 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 PIGQQ9BRB3 760 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 LMF2Q9BU23 707 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 MECRQ9BV79 373 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 DSN1Q9H410 356 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 EML4Q9HC35 981 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 NKIRAS1Q9NYS0 192 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 TMED5Q9Y3A6 229 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 HIVEP1P15822 2718 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 CELSR1Q9NYQ6 3014 aa10.82□□□□□ -0.68
SNRNP200-206ENST00000484372 MPDZO75970 2070 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 AKAP6Q13023 2319 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 DOCK7Q96N67 2140 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 SLC22A20A6NK97 555 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 NPIPB8E9PQR5 432 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 MSTNO14793 375 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 FADS1O60427 444 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 CD99P14209 185 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 GABRA3P34903 492 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 SERPINB5P36952 375 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 ASMTP46597 345 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 GAS1P54826 345 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 MANFP55145 182 aaKnown RBP10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 C17orf67Q0P5P2 114 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 FOXF2Q12947 444 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 HSPB3Q12988 150 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 STX5Q13190 355 aa10.81□□□□□ -0.68
SNRNP200-206ENST00000484372 KEAP1Q14145 624 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms