RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MORN4Q8NDC4 146 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 SETD9Q8NE22 299 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 DIO2Q92813 273 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 TSLPQ969D9 159 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.32
CLK3-204ENST00000483723 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.32
CLK3-204ENST00000483723 SEC16AO15027 2179 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 D6RAR5 112 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 NPIPB9F8W1W9 429 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 TIAF1O95411 115 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 DDAH2O95865 285 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 ADAP00813 363 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 HBQ1P09105 142 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 ELK4P28324 431 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 ZNF136P52737 540 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 SLC37A1P57057 533 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 IL1RL1Q01638 556 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 CDK5R2Q13319 367 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 ELAVL1Q15717 326 aaKnown RBP13.02□□□□□ -0.33
CLK3-204ENST00000483723 CTU2Q2VPK5 515 aaKnown RBP13.02□□□□□ -0.33
CLK3-204ENST00000483723 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 PODNL1Q6PEZ8 512 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 CD300LDQ6UXZ3 194 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 AQP11Q8NBQ7 271 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 SLC46A1Q96NT5 459 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 DGCR6LQ9BY27 220 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 ZNF556Q9HAH1 456 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 C11orf16Q9NQ32 467 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 PNO1Q9NRX1 252 aaKnown RBP13.02□□□□□ -0.33
CLK3-204ENST00000483723 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 PCDHGA10Q9Y5H3 936 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 GMPPBQ9Y5P6 360 aa13.02□□□□□ -0.33
CLK3-204ENST00000483723 A0A087WXM4 84 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 CDHR4A6H8M9 788 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 CLDN24A6NM45 220 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 PEX12O00623 359 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 CYP7B1O75881 506 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 LDOC1O95751 146 aaPredicted RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 DRD5P21918 477 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 HLCSP50747 726 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 PGDP52209 483 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 ZNF141Q15928 474 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 MEP1AQ16819 746 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 FGD3Q5JSP0 725 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 TCEAL6Q6IPX3 200 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 PGBD2Q6P3X8 592 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 GRAMD2AQ8IUY3 354 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 CCDC71Q8IV32 467 aaPredicted RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 BMPERQ8N8U9 685 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 TCEAL3Q969E4 200 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 ZNF566Q969W8 418 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 MCHR1Q99705 422 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 APOL4Q9BPW4 351 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 POLR2J2Q9GZM3 115 aaKnown RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 ING2Q9H160 280 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 POLR2J3Q9H1A7 115 aaKnown RBP13.01□□□□□ -0.33
CLK3-204ENST00000483723 Q9N2J8 555 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 OCIAD1Q9NX40 245 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 REV1Q9UBZ9 1251 aa13.01□□□□□ -0.33
CLK3-204ENST00000483723 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
CLK3-204ENST00000483723 AP3D1O14617 1153 aa13□□□□□ -0.33
CLK3-204ENST00000483723 FRS3O43559 492 aa13□□□□□ -0.33
CLK3-204ENST00000483723 SCRG1O75711 98 aa13□□□□□ -0.33
CLK3-204ENST00000483723 OR5F1O95221 314 aa13□□□□□ -0.33
CLK3-204ENST00000483723 LINGO3P0C6S8 592 aa13□□□□□ -0.33
CLK3-204ENST00000483723 CYP4B1P13584 511 aa13□□□□□ -0.33
CLK3-204ENST00000483723 CRHBPP24387 322 aa13□□□□□ -0.33
CLK3-204ENST00000483723 GGT2P36268 569 aa13□□□□□ -0.33
CLK3-204ENST00000483723 PPICP45877 212 aa13□□□□□ -0.33
CLK3-204ENST00000483723 ALDH3B2P48448 385 aa13□□□□□ -0.33
CLK3-204ENST00000483723 NR1H2P55055 460 aa13□□□□□ -0.33
CLK3-204ENST00000483723 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
CLK3-204ENST00000483723 CXCR4P61073 352 aa13□□□□□ -0.33
CLK3-204ENST00000483723 ESRRGP62508 458 aa13□□□□□ -0.33
CLK3-204ENST00000483723 ST3GAL3Q11203 375 aa13□□□□□ -0.33
CLK3-204ENST00000483723 IL11RAQ14626 422 aa13□□□□□ -0.33
CLK3-204ENST00000483723 TRAM2Q15035 370 aa13□□□□□ -0.33
CLK3-204ENST00000483723 CPEB4Q17RY0 729 aaKnown RBP eCLIP13□□□□□ -0.33
CLK3-204ENST00000483723 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
CLK3-204ENST00000483723 NKAIN1Q4KMZ8 207 aa13□□□□□ -0.33
CLK3-204ENST00000483723 ENTPD8Q5MY95 495 aa13□□□□□ -0.33
CLK3-204ENST00000483723 C1orf94Q6P1W5 598 aa13□□□□□ -0.33
CLK3-204ENST00000483723 KLHL17Q6TDP4 642 aa13□□□□□ -0.33
CLK3-204ENST00000483723 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
CLK3-204ENST00000483723 STT3BQ8TCJ2 826 aa13□□□□□ -0.33
CLK3-204ENST00000483723 G6PC3Q9BUM1 346 aa13□□□□□ -0.33
CLK3-204ENST00000483723 ITPAQ9BY32 194 aa13□□□□□ -0.33
CLK3-204ENST00000483723 FAM192AQ9GZU8 254 aa13□□□□□ -0.33
CLK3-204ENST00000483723 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms