RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 RBMXL3Q8N7X1 1067 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 MIPOL1Q8TD10 442 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 REXO5Q96IC2 774 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 COL21A1Q96P44 957 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 BTBD2Q9BX70 525 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 HES7Q9BYE0 225 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 LUZP4Q9P127 313 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 EGFL7Q9UHF1 273 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 MRTO4Q9UKD2 239 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 ATRXP46100 2492 aa18.33■□□□□ 0.52
TRAPPC12-220ENST00000482645 EXPH5Q8NEV8 1989 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 UGT2B11O75310 529 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 KCNK2O95069 426 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 NTRK2Q16620 822 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 SPATS1Q496A3 300 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 EXOSC6Q5RKV6 272 aaKnown RBP18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 DCST2Q5T1A1 773 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 ATAD3BQ5T9A4 648 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 PGM2L1Q6PCE3 622 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 RTL4Q6ZR62 310 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 GPALPP1Q8IXQ4 340 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 C5orf34Q96MH7 638 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 UBL7Q96S82 380 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 SPATA9Q9BWV2 254 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 EXD2Q9NVH0 621 aa18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 SUCOQ9UBS9 1254 aaKnown RBP18.32■□□□□ 0.52
TRAPPC12-220ENST00000482645 SPENQ96T58 3664 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 ELOVL7A1L3X0 281 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 G3V3Y1 287 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 GSTA4O15217 222 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 CIB2O75838 187 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 IGKV1D-16P01601 117 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 BCHEP06276 602 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PSMD4P55036 377 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PSPHP78330 225 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 ADRM1Q16186 407 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 NADK2Q4G0N4 442 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PRAMEF20Q5VT98 475 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZNF227Q86WZ6 799 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PTRH1Q86Y79 214 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PTOV1Q86YD1 416 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 MICU2Q8IYU8 434 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 MDS2Q8NDY4 140 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 DIO2Q92813 273 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 PCDHAC1Q9H158 963 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 FBXO34Q9NWN3 711 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 GIN1Q9NXP7 522 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 P2RX2Q9UBL9 471 aa18.31■□□□□ 0.52
TRAPPC12-220ENST00000482645 KMT2BQ9UMN6 2715 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TP53I11O14683 189 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 ASNA1O43681 348 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 HS6ST1O60243 411 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TSPAN2O60636 221 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 AGR2O95994 175 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 CCL3P10147 92 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 BMP2P12643 396 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 CD46P15529 392 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 ATP6V1C1P21283 382 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 MAGEA8P43361 318 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TXNL4AP83876 142 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 BNIP2Q12982 314 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 VMACQ2NL98 169 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 GPAT3Q53EU6 434 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZNF766Q5HY98 468 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 ERICH5Q6P6B1 374 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 OLIG3Q7RTU3 272 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 DND1Q8IYX4 353 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TEX19Q8NA77 164 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 C11orf65Q8NCR3 313 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 PSD4Q8NDX1 1056 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TNIP2Q8NFZ5 429 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 NFKBIDQ8NI38 313 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 ASB9Q96DX5 294 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 SGCZQ96LD1 299 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TRIM45Q9H8W5 580 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 A4GALTQ9NPC4 353 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TIMMDC1Q9NPL8 285 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 B3GNT3Q9Y2A9 372 aa18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TLN1Q9Y490 2541 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-220ENST00000482645 TRAV17A0A0B4J275 112 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 OR6C70A6NIJ9 312 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 SOX30O94993 753 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 IL33O95760 270 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 ARAFP10398 606 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 CYP4B1P13584 511 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 NCK1P16333 377 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 NAGAP17050 411 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 HTR1EP28566 365 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 GPR85P60893 370 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 FUT5Q11128 374 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 SCARB2Q14108 478 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZNF169Q14929 603 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 C1orf146Q5VVC0 180 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 SLC22A10Q63ZE4 541 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 BICRALQ6AI39 1079 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZAR1Q86SH2 424 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 FIG4Q92562 907 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 WBP1Q96G27 269 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 G6PC3Q9BUM1 346 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 TMEM38AQ9H6F2 299 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms