RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	GCK	P35557	465 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ASMT	P46597	345 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	RFX3	P48380	749 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	AGFG1	P52594	562 aa	Known RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	DSCR4	P56555	118 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	SRY	Q05066	204 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	FOXF2	Q12947	444 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	PTGR1	Q14914	329 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNHIT3	Q15649	155 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	KRT71	Q3SY84	523 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	AAGAB	Q6PD74	315 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ENPP6	Q6UWR7	440 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	MARCH3	Q86UD3	253 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	CDH24	Q86UP0	819 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	NUP43	Q8NFH3	380 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	OR7A2P	Q8NGA2	310 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	OR4K17	Q8NGC6	315 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZFP28	Q8NHY6	868 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	FBXO30	Q8TB52	745 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	PPP3R2	Q96LZ3	170 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF559	Q9BR84	538 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	C1orf50	Q9BV19	199 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	JKAMP	Q9P055	326 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	MED11	Q9P086	117 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	RAB21	Q9UL25	225 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	HIVEP1	P15822	2718 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	DOCK7	Q96N67	2140 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	IGLV3-32	A0A0A0MS00	114 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	TTC36	A6NLP5	189 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	ITM2A	O43736	263 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	UTS2	O95399	124 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	LAMP1	P11279	417 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	POU3F2	P20265	443 aa	Predicted RBP	13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	CTSS	P25774	331 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	UQCRC1	P31930	480 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	SERPINB4	P48594	390 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	PRKAG1	P54619	331 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	MANF	P55145	182 aa	Known RBP	13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	CLDN15	P56746	228 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	STX5	Q13190	355 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	MYBPH	Q13203	477 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	RCAN2	Q14206	197 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	MLC1	Q15049	377 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	GRAMD1B	Q3KR37	738 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	TNFAIP8L3	Q5GJ75	292 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	C6orf136	Q5SQH8	315 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	MFSD12	Q6NUT3	480 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZAR1	Q86SH2	424 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	GALNT10	Q86SR1	603 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	EXOC3L1	Q86VI1	746 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	HOMEZ	Q8IX15	550 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	CDRT4	Q8N9R6	151 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	SLC16A11	Q8NCK7	471 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	FAM110B	Q8TC76	370 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	RNASE6	Q93091	150 aa	Known RBP	13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	FAM120B	Q96EK7	910 aa	Known RBP	13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	RMND5B	Q96G75	393 aa	Predicted RBP	13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	C16orf58	Q96GQ5	468 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	MS4A4E	Q96PG1	132 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	CRIM1	Q9NZV1	1036 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	SPG11	Q96JI7	2443 aa		13.6	□□□□□ -0.23
CCNL1-222	ENST00000479596	TMEM114	B3SHH9	223 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	EMC8	O43402	210 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	HCRTR2	O43614	444 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	RCBTB2	O95199	551 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	KCNH1	O95259	989 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	IL18BP	O95998	194 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	MAPK1	P28482	360 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	HPCAL1	P37235	193 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	PSMD4	P55036	377 aa	Known RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	PRR5	P85299	388 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	MPP2	Q14168	576 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	TESK1	Q15569	626 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	DUSP5	Q16690	384 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	ATP6AP1L	Q52LC2	224 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	LRIG3	Q6UXM1	1119 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	RIMKLA	Q8IXN7	391 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZZZ3	Q8IYH5	903 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	KRTCAP2	Q8N6L1	136 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	OR5M1	Q8NGP8	315 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	CEP70	Q8NHQ1	597 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	GPR151	Q8TDV0	419 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	DUSP19	Q8WTR2	217 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	SLC9A6	Q92581	669 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	WNT2B	Q93097	391 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	C1GALT1C1	Q96EU7	318 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	OTUB1	Q96FW1	271 aa	Predicted RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	C20orf27	Q9GZN8	174 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	C3orf14	Q9HBI5	128 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	SLC24A3	Q9HC58	644 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	SSU72	Q9NP77	194 aa	Known RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	FBXO34	Q9NWN3	711 aa		13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596	MRTO4	Q9UKD2	239 aa	Known RBP	13.59	□□□□□ -0.23
CCNL1-222	ENST00000479596		H0YC42	278 aa		13.58	□□□□□ -0.24
CCNL1-222	ENST00000479596	RGS16	O15492	202 aa	Predicted RBP	13.58	□□□□□ -0.24
CCNL1-222	ENST00000479596	CTIF	O43310	598 aa	Known RBP	13.58	□□□□□ -0.24
CCNL1-222	ENST00000479596	KCNK2	O95069	426 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms