RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 K7ESM1 405 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 RPE65Q16518 533 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 DTX3Q8N9I9 347 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 OR2L3Q8NG85 312 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 THEM6Q8WUY1 208 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 FAM3CQ92520 227 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 HSPA12BQ96MM6 686 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF471Q9BX82 626 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 CACNG6Q9BXT2 260 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ACOT13Q9NPJ3 140 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 CENPMQ9NSP4 180 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
COL20A1-206ENST00000479501 HCRTR2O43614 444 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SNAPC5O75971 98 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 CDK1P06493 297 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 MAP3K8P41279 467 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 CCR2P41597 374 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 GPR143P51810 404 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 TMEM52BQ4KMG9 183 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 LRRN1Q6UXK5 716 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 C12orf40Q86WS4 652 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 KLBQ86Z14 1044 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 FAM217AQ8IXS0 508 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 ANKK1Q8NFD2 765 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SLC38A5Q8WUX1 472 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 PELOQ9BRX2 385 aaKnown RBP13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SERINC1Q9NRX5 453 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 NTRK2Q16620 822 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SLC44A3Q8N4M1 653 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 OR5M3Q8NGP4 307 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 OR2L8Q8NGY9 312 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 PRRC1Q96M27 445 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 NELL2Q99435 816 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 ARL6Q9H0F7 186 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 MEMO1Q9Y316 297 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 PRRT4C9JH25 899 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 MYOGP15173 224 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 PRKACBP22694 351 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 S100A2P29034 98 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 ALG10BQ5I7T1 473 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SHFQ7M4L6 423 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 VWA5B2Q8N398 1253 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 JSRP1Q96MG2 331 aaPredicted RBP13.5□□□□□ -0.25
COL20A1-206ENST00000479501 POLDIP3Q9BY77 421 aaKnown RBP13.5□□□□□ -0.25
COL20A1-206ENST00000479501 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
COL20A1-206ENST00000479501 NUP214P35658 2090 aaPredicted RBP13.5□□□□□ -0.25
COL20A1-206ENST00000479501 A0A1W2PQL4 384 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SMAD9O15198 467 aaKnown RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SMIM18P0DKX4 95 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 WDR45BQ5MNZ6 344 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 COX20Q5RI15 118 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 TMEM240Q5SV17 173 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ZDHHC1Q8WTX9 485 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ASB16Q96NS5 453 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SLA2Q9H6Q3 261 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 CXorf36Q9H7Y0 433 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 TEX10Q9NXF1 929 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 PRAMEF26H0Y7S4 382 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 NARSO43776 548 aaKnown RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 F3P13726 295 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ADARB1P78563 741 aaKnown RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 MAP4K2Q12851 820 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 PLBD1Q6P4A8 553 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 GDPD1Q8N9F7 314 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 OR6C4Q8NGE1 309 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SGTBQ96EQ0 304 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 OR51E2Q9H255 320 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 PLEKHA1Q9HB21 404 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 DISC1C4P0D8 188 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SLC16A6O15403 523 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 CHP2O43745 196 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 NAA10P41227 235 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ACTC1P68032 377 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 ACTA1P68133 377 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 USP53Q70EK8 1073 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 TMEM17Q86X19 198 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 TSNAXQ99598 290 aaKnown RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 RNF121Q9H920 327 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 TM7SF3Q9NS93 570 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
COL20A1-206ENST00000479501 M0R036 132 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 PSMD9O00233 223 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 HOXC5Q00444 222 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 NFATC4Q14934 902 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 SEC23BQ15437 767 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 KLHL26Q53HC5 615 aa13.49□□□□□ -0.25
COL20A1-206ENST00000479501 PODNL1Q6PEZ8 512 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms