RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 WDSUB1Q8N9V3 476 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 NEIL3Q8TAT5 605 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 ADAMTS15Q8TE58 950 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 SSC4DQ8WTU2 575 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 PHF10Q8WUB8 498 aaKnown RBP14.13□□□□□ -0.15
C9orf3-217ENST00000479161 SLC9A6Q92581 669 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 SARAFQ96BY9 339 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 EFHD2Q96C19 240 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-217ENST00000479161 NEURL3Q96EH8 262 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 C16orf58Q96GQ5 468 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 OR52E6Q96RD3 313 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 HOXD1Q9GZZ0 328 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 TSPAN10Q9H1Z9 355 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-217ENST00000479161 EQTNQ9NQ60 294 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 ERRFI1Q9UJM3 462 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-217ENST00000479161 ICE1Q9Y2F5 2266 aa14.13□□□□□ -0.15
C9orf3-217ENST00000479161 PCNX3Q9H6A9 2034 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 TRGV5A0A0B4J1U4 118 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 A0A1B0GTH9 108 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 A0A1W2PQD3 144 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 FAM234BA2RU67 622 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 FAM166BA8MTA8 275 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 ALG1L2C9J202 215 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 E9PLN8 166 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 SEMA7AO75326 666 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 AGFG2O95081 481 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 ABOP16442 354 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 ZFP36L2P47974 494 aaKnown RBP14.12□□□□□ -0.15
C9orf3-217ENST00000479161 STX1BP61266 288 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 POU6F2P78424 691 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-217ENST00000479161 C17orf67Q0P5P2 114 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 SAXO2Q658L1 398 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 DESI1Q6ICB0 168 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 MISPQ8IVT2 679 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 COX18Q8N8Q8 333 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 CHDHQ8NE62 594 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-217ENST00000479161 OR4A15Q8NGL6 344 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 PIK3R3Q92569 461 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 GNRHR2Q96P88 292 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 VKORC1Q9BQB6 163 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 DEFB127Q9H1M4 99 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 RABEP2Q9H5N1 569 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 UBQLN4Q9NRR5 601 aa14.12□□□□□ -0.15
C9orf3-217ENST00000479161 RNF103-CHMP3A0A140T963 221 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 GXYLT2A0PJZ3 443 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 CYSRT1A8MQ03 144 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 LRRTM2O43300 516 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 IGKV1D-16P01601 117 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 AGAP20933 346 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 ENDOUP21128 410 aaKnown RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 GDF1P27539 372 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 SRD5A2P31213 254 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 TRPC1P48995 793 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 POLR2JP52435 117 aaKnown RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 RCAN2Q14206 197 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 GANABQ14697 944 aaKnown RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 ANGPTL8Q6UXH0 198 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 SZRD1Q7Z422 152 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 WDR53Q7Z5U6 358 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 DOLPP1Q86YN1 238 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 FADS6Q8N9I5 356 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 RMND5BQ96G75 393 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 PANX1Q96RD7 426 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 OR2B2Q9GZK3 357 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 TP63Q9H3D4 680 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-217ENST00000479161 RMND5AQ9H871 391 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 GALNT9Q9HCQ5 603 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 SERHLQ9NQF3 203 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 POLE3Q9NRF9 147 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 TRIM33Q9UPN9 1127 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 GMEB1Q9Y692 573 aa14.11□□□□□ -0.15
C9orf3-217ENST00000479161 CCDC154A6NI56 674 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 CDC40O60508 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
C9orf3-217ENST00000479161 UTS2O95399 124 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 ACTL6AO96019 429 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 MATN1P21941 496 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 MSX1P28360 303 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 PTGER4P35408 488 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 ANXA11P50995 505 aaKnown RBP14.1□□□□□ -0.15
C9orf3-217ENST00000479161 DGKQP52824 942 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 C3AR1Q16581 482 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 GLYR1Q49A26 553 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-217ENST00000479161 HEPHL1Q6MZM0 1159 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 BLOC1S3Q6QNY0 202 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 RPTNQ6XPR3 784 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 ANKRD46Q86W74 232 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 TSPEARQ8WU66 669 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 PMM1Q92871 262 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 ITCHQ96J02 903 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 JSRP1Q96MG2 331 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-217ENST00000479161 PSMG3-AS1Q96PY0 264 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 OR7D2Q96RA2 312 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 NMUR2Q9GZQ4 415 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 LDAHQ9H6V9 325 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 EXD2Q9NVH0 621 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 SUCOQ9UBS9 1254 aaKnown RBP14.1□□□□□ -0.15
C9orf3-217ENST00000479161 MEMO1Q9Y316 297 aa14.1□□□□□ -0.15
C9orf3-217ENST00000479161 ARHGAP21Q5T5U3 1957 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms