RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ESRP2Q9H6T0 727 aaKnown RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 NGBQ9NPG2 151 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 GLRX2Q9NS18 164 aa15.35■□□□□ 0.05
VIM-204ENST00000478746 GDF2Q9UK05 429 aaPredicted RBP15.35■□□□□ 0.05
VIM-204ENST00000478746 ESRRBO95718 433 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 CLK3P49761 638 aaKnown RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 TRA2BP62995 288 aaKnown RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 IRF9Q00978 393 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 ZNF844Q08AG5 666 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 GALNT1Q10472 559 aaPredicted RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 LGSNQ5TDP6 509 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 GGNQ86UU5 652 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 OR9A2Q8NGT5 310 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 S100PBPQ96BU1 408 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 C11orf24Q96F05 449 aaPredicted RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 C19orf24Q9BVV8 132 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 ALG2Q9H553 416 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 ELOVL6Q9H5J4 265 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 PAQR5Q9NXK6 330 aaPredicted RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 TAS2R9Q9NYW1 312 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 MCTS1Q9ULC4 181 aaKnown RBP15.34■□□□□ 0.05
VIM-204ENST00000478746 ABCG2Q9UNQ0 655 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 SNX8Q9Y5X2 465 aa15.34■□□□□ 0.05
VIM-204ENST00000478746 ZSCAN12O43309 604 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 SSX4O60224 188 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 SYNGR4O95473 234 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 C2P06681 752 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 GSTA2P09210 222 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 PGGHGQ32M88 737 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 SH2D4BQ5SQS7 431 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 KLC3Q6P597 504 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 DNAJC14Q6Y2X3 702 aaPredicted RBP15.33■□□□□ 0.04
VIM-204ENST00000478746 CCDC91Q7Z6B0 441 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 MARCH3Q86UD3 253 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 MTBPQ96DY7 904 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 RTN4RQ9BZR6 473 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 C12orf49Q9H741 205 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 LRTM1Q9HBL6 345 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 FARSBQ9NSD9 589 aaKnown RBP15.33■□□□□ 0.04
VIM-204ENST00000478746 TMEM160Q9NX00 188 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 FLRT3Q9NZU0 649 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 ANK2Q01484 3957 aa15.33■□□□□ 0.04
VIM-204ENST00000478746 IGHV4-30-2A0A087WSY4 118 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 SHISA8B8ZZ34 492 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 EIF3HO15372 352 aaKnown RBP eCLIP15.32■□□□□ 0.04
VIM-204ENST00000478746 PLOD3O60568 738 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CD8AP01732 235 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 TMEM249Q2WGJ8 235 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CYP27C1Q4G0S4 372 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 GTF2IRD2BQ6EKJ0 949 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 MFSD12Q6NUT3 480 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 GTF2IRD2Q86UP8 949 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 SAMD14Q8IZD0 417 aaPredicted RBP15.32■□□□□ 0.04
VIM-204ENST00000478746 C1orf52Q8N6N3 182 aaKnown RBP15.32■□□□□ 0.04
VIM-204ENST00000478746 PTGR2Q8N8N7 351 aaPredicted RBP15.32■□□□□ 0.04
VIM-204ENST00000478746 OR10D3Q8NH80 312 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 HSD17B8Q92506 261 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 PHF21BQ96EK2 531 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 TNFRSF13CQ96RJ3 184 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 TRAF4Q9BUZ4 470 aaPredicted RBP15.32■□□□□ 0.04
VIM-204ENST00000478746 FBXO34Q9NWN3 711 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 NMRK1Q9NWW6 199 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 LPAR3Q9UBY5 353 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 CADP27708 2225 aa15.32■□□□□ 0.04
VIM-204ENST00000478746 FAM234BA2RU67 622 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 CCDC188H7C350 402 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 GMFGO60234 142 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 KLHL2O95198 593 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 PDYNP01213 254 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 TUBBP07437 444 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 ADH6P28332 368 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 THBS2P35442 1172 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 PSG6Q00889 435 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 C17orf67Q0P5P2 114 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 TRAF3Q13114 568 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 TSC22D1Q15714 1073 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 TMEM44Q2T9K0 475 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 FIGNL1Q6PIW4 674 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 EXOC3L1Q86VI1 746 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 WDR75Q8IWA0 830 aaKnown RBP15.31■□□□□ 0.04
VIM-204ENST00000478746 OR7G2Q8NG99 324 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 OR4F6Q8NGB9 312 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 SELENOMQ8WWX9 145 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 EXOSC8Q96B26 276 aaKnown RBP15.31■□□□□ 0.04
VIM-204ENST00000478746 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
VIM-204ENST00000478746 SHARPINQ9H0F6 387 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 BRF2Q9HAW0 419 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 GIMAP4Q9NUV9 329 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 FAM120CQ9NX05 1096 aaKnown RBP15.31■□□□□ 0.04
VIM-204ENST00000478746 SENP1Q9P0U3 644 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 XPR1Q9UBH6 696 aa15.31■□□□□ 0.04
VIM-204ENST00000478746 YLPM1P49750 1951 aaKnown RBP15.31■□□□□ 0.04
VIM-204ENST00000478746 CXCL13O43927 109 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 OPN1LWP04000 364 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 IL32P24001 234 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 MPIP34949 423 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 ZNF155Q12901 538 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms