RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 COL12A1Q99715 3063 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 PRAMEF25A6NGN4 478 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 HS6ST1O60243 411 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 FADS1O60427 444 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 ICOSLGO75144 302 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 AK1P00568 194 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 C1QCP02747 245 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 KHKP50053 298 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 ALDH6A1Q02252 535 aaKnown RBP24.51■■□□□ 1.51
CCM2-211ENST00000478582 GTDC1Q4AE62 458 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 DNAJC14Q6Y2X3 702 aaPredicted RBP24.51■■□□□ 1.51
CCM2-211ENST00000478582 RNF130Q86XS8 419 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 DPP10Q8N608 796 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 SSC4DQ8WTU2 575 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 TMEM41AQ96HV5 264 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 OSBPL11Q9BXB4 747 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 TTTY12Q9BZ98 90 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 ADAM21Q9UKJ8 722 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 BOKQ9UMX3 212 aaPredicted RBP24.51■■□□□ 1.51
CCM2-211ENST00000478582 ABCG2Q9UNQ0 655 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 GMEB1Q9Y692 573 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 HECTD1Q9ULT8 2610 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 HIVEP3Q5T1R4 2406 aa24.51■■□□□ 1.51
CCM2-211ENST00000478582 USP9XQ93008 2570 aaPredicted RBP24.5■■□□□ 1.51
CCM2-211ENST00000478582 ZNF24P17028 368 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 ANXA11P50995 505 aaKnown RBP24.5■■□□□ 1.51
CCM2-211ENST00000478582 TDGF1P3P51864 188 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 MVDP53602 400 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 DCST2Q5T1A1 773 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 AP1ARQ63HQ0 302 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 HEPHL1Q6MZM0 1159 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 FIGNL1Q6PIW4 674 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 BNC2Q6ZN30 1099 aaPredicted RBP24.5■■□□□ 1.51
CCM2-211ENST00000478582 PACS2Q86VP3 889 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 SIAH3Q8IW03 269 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 ZFP64Q9NPA5 681 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 EXD2Q9NVH0 621 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 FBXO34Q9NWN3 711 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 KLRF1Q9NZS2 232 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 SVILO95425 2214 aa24.5■■□□□ 1.51
CCM2-211ENST00000478582 ZGRF1Q86YA3 2104 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 POLEQ07864 2286 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 TRBV5-3A0A0A0MS03 114 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 ANGPT2O15123 496 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 SHOX2O60902 331 aaPredicted RBP24.49■■□□□ 1.51
CCM2-211ENST00000478582 UTS2O95399 124 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 NGFRP08138 427 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 GUSBP08236 651 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 OR12D1P0DN82 309 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 MST1P26927 711 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 EVI2BP34910 448 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 RFX3P48380 749 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 GAS1P54826 345 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 CASP9P55211 416 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 MAPRE2Q15555 327 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 ARHGAP11BQ3KRB8 267 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 CCNJQ5T5M9 372 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 TNFAIP8L2Q6P589 184 aaPredicted RBP24.49■■□□□ 1.51
CCM2-211ENST00000478582 ANGPTL8Q6UXH0 198 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 SLC22A16Q86VW1 577 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 MSRB3Q8IXL7 192 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 SDF2Q99470 211 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 SLC25A37Q9NYZ2 338 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 SLAMF8Q9P0V8 285 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 CAPN7Q9Y6W3 813 aa24.49■■□□□ 1.51
CCM2-211ENST00000478582 LRRC3CA6NJW4 275 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 ACOT7O00154 380 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 HMGN4O00479 90 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 RFC3P40938 356 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 PLGLB1Q02325 96 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 COQ5Q5HYK3 327 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 ATAD3BQ5T9A4 648 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 FNDC7Q5VTL7 733 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 DLEU7Q6UYE1 221 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 EML6Q6ZMW3 1958 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 ZAR1Q86SH2 424 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 RETREG3Q86VR2 466 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 OR52N2Q8NGI0 321 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 XAGE5Q8WWM1 108 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 ZNF597Q96LX8 424 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 GALNT9Q9HCQ5 603 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 FLRT3Q9NZU0 649 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 SLC5A6Q9Y289 635 aa24.48■■□□□ 1.51
CCM2-211ENST00000478582 CLIC1O00299 241 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 ADAM10O14672 748 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 TBXA2RP21731 343 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 PPIAP62937 165 aaKnown RBP24.47■■□□□ 1.51
CCM2-211ENST00000478582 GRAMD1BQ3KR37 738 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 KRTCAP3Q53RY4 240 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 COX20Q5RI15 118 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 GALNT10Q86SR1 603 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 MTDHQ86UE4 582 aaKnown RBP24.47■■□□□ 1.51
CCM2-211ENST00000478582 OR4C3Q8NH37 302 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 RAB8BQ92930 207 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 AURKBQ96GD4 344 aaPredicted RBP24.47■■□□□ 1.51
CCM2-211ENST00000478582 CCT8L2Q96SF2 557 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 HOXD1Q9GZZ0 328 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 MYLK2Q9H1R3 596 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 RAD21L1Q9H4I0 556 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 ZDHHC11Q9H8X9 412 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms