RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 LYSMD4Q5XG99 296 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TCEAL6Q6IPX3 200 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 Q6ZNB5 142 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SLC38A5Q8WUX1 472 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 HLA-CQ95604 372 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ATXN7L1Q9ULK2 861 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TBC1D24Q9ULP9 559 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PADI2Q9Y2J8 665 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PLEKHM1Q9Y4G2 1056 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ALPLP05186 524 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SYPP08247 313 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 H2BFMP0C1H6 154 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 UGT2B7P16662 529 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TUBB3Q13509 450 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF782Q6ZMW2 699 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 VRK2Q86Y07 508 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SPARTQ8N0X7 666 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM151AQ8N4L1 468 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM41AQ96HV5 264 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 CNN2Q99439 309 aaKnown RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 WDR77Q9BQA1 342 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 DPAGT1Q9H3H5 408 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 C14orf119Q9NWQ9 140 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 KLF15Q9UIH9 416 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PEX11BO96011 259 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 EGFP01133 1207 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ELOAQ14241 798 aaKnown RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 GPR18Q14330 331 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 SCGB2B2Q4G0G5 96 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 METRNLQ641Q3 311 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ZFP90Q8TF47 636 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 DNAJA4Q8WW22 397 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.275e-7■■■■■ 29.4
NPHP4-208ENST00000478423 BAIAP2Q9UQB8 552 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 J3KTA2 159 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 KCNK5O95279 499 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 ARRB2P32121 409 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 OR1D4P47884 311 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 CD83Q01151 205 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 AKIRIN2Q53H80 203 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 LEG1Q6P5S2 330 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 PODNL1Q6PEZ8 512 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 C16orf58Q96GQ5 468 aa13.37□□□□□ -0.27
NPHP4-208ENST00000478423 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-208ENST00000478423 GFYI3L273 518 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 SRPX2O60687 465 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FARS2O95363 451 aaKnown RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FUT1P19526 365 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 OTX2P32243 289 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 POU4F2Q12837 409 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 CARD17Q5XLA6 110 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 MFSD9Q8NBP5 474 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 CST11Q9H112 138 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 CXorf36Q9H7Y0 433 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 STUB1Q9UNE7 303 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 COL4A5P29400 1685 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FZD6O60353 706 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 BCAS1O75363 584 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 KCNJ5P48544 419 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 MS4A15Q8N5U1 240 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 CHDHQ8NE62 594 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 OR1E3Q8WZA6 343 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 BEX2Q9BXY8 128 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 BEX1Q9HBH7 125 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 POM121BA6NF01 834 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 HBQ1P09105 142 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 LEXMQ3ZCV2 418 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 PTCRAQ6ISU1 281 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FAM111BQ6SJ93 734 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 TMPRSS12Q86WS5 348 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 OR13H1Q8NG92 308 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 CEP76Q8TAP6 659 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FRMD6Q96NE9 622 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
NPHP4-208ENST00000478423 SMURF1Q9HCE7 757 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 TNFRSF12AQ9NP84 129 aa13.36□□□□□ -0.27
NPHP4-208ENST00000478423 FAM171A2A8MVW0 826 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 IL33O95760 270 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 TPMTP51580 245 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms