RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 CCDC30Q5VVM6 783 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 TXNRD3NBQ6F5E7 133 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 PM20D1Q6GTS8 502 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 C11orf57Q6ZUT1 292 aaPredicted RBP-0.13□□□□□ -2.43
CALD1-218ENST00000478075 FAM220AQ7Z4H9 259 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 PCP2Q8IVA1 136 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 SKA3Q8IX90 412 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 LINC00518Q8N0U6 118 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 ZNF664Q8N3J9 261 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 SPATA18Q8TC71 538 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 PSMG2Q969U7 264 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 EXOSC8Q96B26 276 aaKnown RBP-0.13□□□□□ -2.43
CALD1-218ENST00000478075 RASL11BQ9BPW5 248 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 NRN1Q9NPD7 142 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 DMAP1Q9NPF5 467 aaPredicted RBP-0.13□□□□□ -2.43
CALD1-218ENST00000478075 MRPL17Q9NRX2 175 aaKnown RBP-0.13□□□□□ -2.43
CALD1-218ENST00000478075 VPS18Q9P253 973 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 SPRR3Q9UBC9 169 aa-0.13□□□□□ -2.43
CALD1-218ENST00000478075 MTRF1LQ9UGC7 380 aaKnown RBP-0.13□□□□□ -2.43
CALD1-218ENST00000478075 SCN1AP35498 2009 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 hCG_1807616A0A1W2PRN6 198 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 YDJCA8MPS7 323 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 PDLIM1O00151 329 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 EI24O14681 340 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 KIAA0754O94854 1291 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 THRBP10828 461 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 TRIM23P36406 574 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 KIR2DS2P43631 304 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 TKTL1P51854 596 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 NLRP11P59045 1033 aaKnown RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 FLI1Q01543 452 aaPredicted RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 ARFRP1Q13795 201 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 ZRSR2Q15696 482 aaKnown RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 HKDC1Q2TB90 917 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 GPAT3Q53EU6 434 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 HSP90AB4PQ58FF6 505 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 PRR5LQ6MZQ0 368 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 CLEC4GQ6UXB4 293 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 MMS22LQ6ZRQ5 1243 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 GDPD3Q7L5L3 318 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 LCA5Q86VQ0 697 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 Q8N976 141 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 SYNPRQ8TBG9 265 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 SETD6Q8TBK2 473 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 RGP1Q92546 391 aaPredicted RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 ESR2Q92731 530 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 ATP6V0A1Q93050 837 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 DNAJA3Q96EY1 480 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 ZNF559Q9BR84 538 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 TEKT3Q9BXF9 490 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 PNO1Q9NRX1 252 aaKnown RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 LHX3Q9UBR4 397 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 GIMAP2Q9UG22 337 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 RAB23Q9ULC3 237 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 FOXA2Q9Y261 457 aaPredicted RBP-0.14□□□□□ -2.43
CALD1-218ENST00000478075 TMEM5Q9Y2B1 443 aa-0.14□□□□□ -2.43
CALD1-218ENST00000478075 A0A1W2PNN7 141 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 WDR46O15213 610 aaKnown RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 ADAM20O43506 726 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 SNAPINO95295 136 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 FYNP06241 537 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 KRTAP10-4P60372 401 aaPredicted RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 PRPS1P60891 318 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 MRPS11P82912 194 aaKnown RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 BAMBIQ13145 260 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 GNMTQ14749 295 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 CYP51A1Q16850 503 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 C9orf152Q5JTZ5 239 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 FBXW9Q5XUX1 488 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 WDR74Q6RFH5 385 aaPredicted RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 ARMCX2Q7L311 632 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 PI4KAP1Q8N8J0 262 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 GATSQ8NAP1 163 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 SELENOMQ8WWX9 145 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 TREX2Q9BQ50 279 aaPredicted RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 GHITMQ9H3K2 345 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 LMAN1LQ9HAT1 526 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 FANCFQ9NPI8 374 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 MEPEQ9NQ76 525 aaPredicted RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 PNPLA3Q9NST1 481 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 NRBP1Q9UHY1 535 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 BTNL2Q9UIR0 455 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 ERVK-19Q9WJR5 959 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 WDR45Q9Y484 360 aa-0.15□□□□□ -2.43
CALD1-218ENST00000478075 RSF1Q96T23 1441 aaPredicted RBP-0.15□□□□□ -2.43
CALD1-218ENST00000478075 USP24Q9UPU5 2620 aa-0.16□□□□□ -2.43
CALD1-218ENST00000478075 DOCK8Q8NF50 2099 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 SMIM28A0A1B0GU29 152 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 H0YIG0 161 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 OVOL1O14753 267 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 OR10H3O60404 316 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 RANBP6O60518 1105 aaKnown RBP-0.16□□□□□ -2.44
CALD1-218ENST00000478075 SS18L1O75177 396 aaPredicted RBP-0.16□□□□□ -2.44
CALD1-218ENST00000478075 SCRG1O75711 98 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 PSMD10O75832 226 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 CDRT1O95170 752 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 EPOP01588 193 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 SLC4A1P02730 911 aa-0.16□□□□□ -2.44
CALD1-218ENST00000478075 EZRP15311 586 aaKnown RBP-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms