RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 BAIAP2L2Q6UXY1 529 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 DET1Q7L5Y6 550 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 TSPAN33Q86UF1 283 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PGBD5Q8N414 524 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 OR2T12Q8NG77 320 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 CAMK1GQ96NX5 476 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 HHATLQ9HCP6 504 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC6A20Q9NP91 592 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 DCAF13Q9NV06 445 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 LSM7Q9UK45 103 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 IKZF3Q9UKT9 509 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 EXO1Q9UQ84 846 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 PLEKHM1Q9Y4G2 1056 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 INSL6Q9Y581 213 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 ANAPC1Q9H1A4 1944 aa11.92□□□□□ -0.5
RTFDC1-207ENST00000477573 A0A087X0M5 115 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 A0A1B0GX30 115 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 PPIHO43447 177 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 CDRT1O95170 752 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SIX3O95343 332 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 PLGP00747 810 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 FGBP02675 491 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SERPINA5P05154 406 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ADH1AP07327 375 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 OR4E1P0C645 316 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF44P15621 663 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 MAPK3P27361 379 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 HOXD9P28356 352 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SUOXP51687 545 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 GAGE1Q13065 139 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SIRPB2Q5JXA9 342 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 MANEAQ5SRI9 462 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 PTRHD1Q6GMV3 140 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 MBOAT1Q6ZNC8 495 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 OR9Q1Q8NGQ5 310 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 OSTF1Q92882 214 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 RFKQ969G6 155 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF354BQ96LW1 612 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 MS4A4EQ96PG1 132 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 MGME1Q9BQP7 344 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 TEX12Q9BXU0 123 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 NUDT15Q9NV35 164 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 NDUFB11Q9NX14 153 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 GPR83Q9NYM4 423 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 STOX2Q9P2F5 926 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 FKBPLQ9UIM3 349 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SH3BGRL2Q9UJC5 107 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 A0A087X1B8 175 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 HMSDA8MTL9 139 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 CBR3O75828 277 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 AKR7A3O95154 331 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 NSA2O95478 260 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ABCD3P28288 659 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 GGT2P36268 569 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 RGS4P49798 205 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 RAB10P61026 200 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 TNFRSF9Q07011 255 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 PPP1R8Q12972 351 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 CASP12Q6UXS9 341 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF605Q86T29 641 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 NUDT13Q86X67 352 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 HJURPQ8NCD3 748 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 FAM162AQ96A26 154 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 RAB3CQ96E17 227 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 LCORQ96JN0 433 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF583Q96ND8 569 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 DDOQ99489 341 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC38A1Q9H2H9 487 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 PIF1Q9H611 641 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 KLHL9Q9P2J3 617 aa11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 EIF2B4Q9UI10 523 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-207ENST00000477573 COLCA2A8K830 154 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 STK25O00506 426 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 TSPAN3O60637 253 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 AGR2O95994 175 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 ZFP36L2P47974 494 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 POLR2JP52435 117 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 MEF2AQ02078 507 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 SEMG2Q02383 582 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 CAMK2GQ13555 558 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 P2RY14Q15391 338 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 TOMM34Q15785 309 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 TMEM95Q3KNT9 176 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 SPDYE7PQ495Y7 208 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 ARHGAP40Q5TG30 622 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 HEPHL1Q6MZM0 1159 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 FAHD1Q6P587 224 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 GSG1LQ6UXU4 331 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF730Q6ZMV8 503 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms