RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 COQ9O75208 318 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MMP11P24347 488 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 TCTN3Q6NUS6 607 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 C8orf82Q6P1X6 216 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF765Q7L2R6 523 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF547Q8IVP9 402 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 FBXL6Q8N531 539 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OR5T3Q8NGG3 340 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OR1E3Q8WZA6 343 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 UCN3Q969E3 161 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MRGPRX3Q96LB0 322 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PRRC1Q96M27 445 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 FRMD6Q96NE9 622 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 LRRC3BQ96PB8 259 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 SGPP1Q9BX95 441 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MRPL15Q9P015 296 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 A8MVJ9 347 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 FAM47E-STBD1D6RA91 191 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 H0YC42 278 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 H0YGG7 62 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 UPK1BO75841 260 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ANXA2P07355 339 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 CSRP3P50461 194 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ARF3P61204 181 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MAT1AQ00266 395 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 DECR1Q16698 335 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 SYT6Q5T7P8 510 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ABHD17CQ6PCB6 329 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OR8H1Q8NGG4 311 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 OMA1Q96E52 524 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MS4A4EQ96PG1 132 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 EPHX3Q9H6B9 360 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 ACSS1Q9NUB1 689 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 MRTO4Q9UKD2 239 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 POU2F3Q9UKI9 436 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 CA14Q9ULX7 337 aa10.35□□□□□ -0.75
COL27A1-204ENST00000477421 RBBP6Q7Z6E9 1792 aaKnown RBP10.35□□□□□ -0.75
COL27A1-204ENST00000477421 SPTA1P02549 2419 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 UNC13CQ8NB66 2214 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CDC14CA4D256 554 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 TRAPPC13A5PLN9 417 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SLC9B1P1A6NJY1 282 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SCO2O43819 266 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 NCR1O76036 304 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CLEC2LP0C7M8 214 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 F3P13726 295 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 HK1P19367 917 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 GNALP38405 381 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 KCNJ5P48544 419 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SHHQ15465 462 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 BICRALQ6AI39 1079 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 KIAA1211LQ6NV74 962 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CALHM3Q86XJ0 350 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 YIPF7Q8N8F6 280 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 TOE1Q96GM8 510 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 JSRP1Q96MG2 331 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 HHIPQ96QV1 700 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 ING4Q9UNL4 249 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 TDRD15B5MCY1 1934 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 PLXNA1Q9UIW2 1896 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 HMGN4O00479 90 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 PRODHO43272 600 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 EEF1E1O43324 174 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 PRKYO43930 277 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 UBXN7O94888 489 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CPNE6O95741 557 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CSN2P05814 226 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 RNH1P13489 461 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SLC6A6P31641 620 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 RAE1P78406 368 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 PUM1Q14671 1186 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 ARHGAP40Q5TG30 622 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 STEAP3Q658P3 488 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 MOSPD2Q8NHP6 518 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 FGF14Q92915 247 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CNDP2Q96KP4 475 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 ALOXE3Q9BYJ1 711 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 TMEM38AQ9H6F2 299 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 CPNE7Q9UBL6 633 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 LCTP09848 1927 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 NCOR1O75376 2440 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 KCNE1BA0A087WTH5 132 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 PLGP00747 810 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 TGM4P49221 684 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 GPR18Q14330 331 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 XAF1Q6GPH4 301 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 USP51Q70EK9 711 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SLC46A3Q7Z3Q1 461 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SDR9C7Q8NEX9 313 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 OR6N2Q8NGY6 317 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 SPRYD4Q8WW59 207 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms