RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TTC36A6NLP5 189 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 TP53I11O14683 189 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 ZNHIT1O43257 154 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 ABCB7O75027 752 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 P04436 131 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 RFPL3SP0C7P2 107 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 CNR1P21554 472 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 KHKP50053 298 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 MAPRE2Q15555 327 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 ARHGAP11BQ3KRB8 267 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 RABL3Q5HYI8 236 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 FNDC7Q5VTL7 733 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 NANOGP8Q6NSW7 305 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 MARCH3Q86UD3 253 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 LSRQ86X29 649 aaPredicted RBP14.54□□□□□ -0.08
COPS3-207ENST00000477299 FBXW8Q8N3Y1 598 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 CHDHQ8NE62 594 aaPredicted RBP14.54□□□□□ -0.08
COPS3-207ENST00000477299 ROPN1LQ96C74 230 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 KLHDC3Q9BQ90 382 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 ANGPTL4Q9BY76 406 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 TSPAN10Q9H1Z9 355 aaPredicted RBP14.54□□□□□ -0.08
COPS3-207ENST00000477299 PIF1Q9H611 641 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 RUBCNLQ9H714 662 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 NANOGQ9H9S0 305 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 MKLN1Q9UL63 735 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 GTF3C1Q12789 2109 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 DNAJC13O75165 2243 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 SPTA1P02549 2419 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 BAHCC1Q9P281 2608 aa14.54□□□□□ -0.08
COPS3-207ENST00000477299 SCO2O43819 266 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 TNFRSF21O75509 655 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 CHRM4P08173 479 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 TFPTP0C1Z6 253 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 KRT20P35900 424 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 TMED10P49755 219 aaKnown RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 GAS1P54826 345 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 DSTNP60981 165 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 CHRNEQ04844 493 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 FOXO1Q12778 655 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 STX5Q13190 355 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 GPR68Q15743 365 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 MAPK14Q16539 360 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.53□□□□□ -0.08
COPS3-207ENST00000477299 TRMT5Q32P41 509 aaKnown RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 RPS26P11Q5JNZ5 115 aaPredicted RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 OR5M10Q6IEU7 315 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 POGLUT1Q8NBL1 392 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 TMEM178AQ8NBL3 297 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 RNF138Q8WVD3 245 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 SNRNP40Q96DI7 357 aaKnown RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 QRSL1Q9H0R6 528 aaKnown RBP14.53□□□□□ -0.08
COPS3-207ENST00000477299 ASF1BQ9NVP2 202 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 PCDHGB6Q9Y5F9 930 aa14.53□□□□□ -0.08
COPS3-207ENST00000477299 KALRNO60229 2985 aa14.52□□□□□ -0.08
COPS3-207ENST00000477299 PRAMEF25A6NGN4 478 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 LRRC3CA6NJW4 275 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 DUXAA6NLW8 204 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 TTLL8A6PVC2 850 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 CDK2AP1O14519 115 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 GNB5O14775 395 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 SUV39H1O43463 412 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 OIP5O43482 229 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 TRIM3O75382 744 aaPredicted RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 DCTN3O75935 186 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 H6PDO95479 791 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 CBX6O95503 412 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 OXSR1O95747 527 aaPredicted RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 KRT16P08779 473 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 GPX2P18283 190 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 MST1P26927 711 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 GZMMP51124 257 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 CBX1P83916 185 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 EFR3AQ14156 821 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 ADRM1Q16186 407 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 GPAT3Q53EU6 434 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 COQ5Q5HYK3 327 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 TYW3Q6IPR3 259 aaKnown RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 FRRS1Q6ZNA5 592 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 C16orf62Q7Z3J2 963 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 DND1Q8IYX4 353 aaKnown RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 GATSQ8NAP1 163 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 SLC38A5Q8WUX1 472 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 ARSGQ96EG1 525 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 JSRP1Q96MG2 331 aaPredicted RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 FRMD6Q96NE9 622 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 THUMPD3Q9BV44 507 aaKnown RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 METTL7AQ9H8H3 244 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 MRGBPQ9NV56 204 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 KLRF1Q9NZS2 232 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 CNIH4Q9P003 139 aa14.52□□□□□ -0.09
COPS3-207ENST00000477299 KLF13Q9Y2Y9 288 aaPredicted RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 PRRC2CQ9Y520 2896 aaKnown RBP14.52□□□□□ -0.09
COPS3-207ENST00000477299 FAM166BA8MTA8 275 aa14.51□□□□□ -0.09
COPS3-207ENST00000477299 BBIP1A8MTZ0 92 aa14.51□□□□□ -0.09
COPS3-207ENST00000477299 NPIPB9F8W1W9 429 aa14.51□□□□□ -0.09
COPS3-207ENST00000477299 ASNA1O43681 348 aa14.51□□□□□ -0.09
COPS3-207ENST00000477299 RASAL1O95294 804 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms