RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 OR7D2Q96RA2 312 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 OR52E6Q96RD3 313 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ZBTB18Q99592 522 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SLC6A15Q9H2J7 730 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 PIGUQ9H490 435 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 SERHLQ9NQF3 203 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FAM120CQ9NX05 1096 aaKnown RBP8.85□□□□□ -0.99
HDAC3-208ENST00000476739 TINAGQ9UJW2 476 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 FBXL2Q9UKC9 423 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 C15orf41Q9Y2V0 281 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 WIF1Q9Y5W5 379 aa8.85□□□□□ -0.99
HDAC3-208ENST00000476739 MYO7BQ6PIF6 2116 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 NPIPA5A0A0B4J1W7 369 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 A0A0G2JND7 137 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 NPIPA7E9PJI5 369 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 EBAG9O00559 213 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 LRRTM2O43300 516 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 UBR5O95071 2799 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 AGFG2O95081 481 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 KCNH1O95259 989 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 IGHG3P01860 377 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 IL6P05231 212 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 NPIPA8P0DM63 369 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MATN1P21941 496 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 UQCRC2P22695 453 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 GDF1P27539 372 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MDH1P40925 334 aaKnown RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 CA7P43166 264 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TRPC1P48995 793 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MRPL19P49406 292 aaKnown RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 POLR2JP52435 117 aaKnown RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 GYS2P54840 703 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 PSPHP78330 225 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 POU6F2P78424 691 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SNTA1Q13424 505 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SLC10A1Q14973 349 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 GTDC1Q4AE62 458 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 VPS26BQ4G0F5 336 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TIGD2Q4W5G0 525 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 EIPR1Q53HC9 387 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SAXO2Q658L1 398 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TNFAIP8L2Q6P589 184 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 DNAJC14Q6Y2X3 702 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 C3P1Q6ZMU1 363 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 Q6ZPB1 254 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TRILQ7L0X0 811 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MARCH3Q86UD3 253 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 DOLPP1Q86YN1 238 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 COX18Q8N8Q8 333 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 GLB1L3Q8NCI6 653 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 VPS37AQ8NEZ2 397 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 OR1J4Q8NGS1 313 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 OR4C3Q8NH37 302 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 ADAMTS15Q8TE58 950 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 RAB8BQ92930 207 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MED12Q93074 2177 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MOAP1Q96BY2 351 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SLC35G5Q96KT7 338 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 PANX1Q96RD7 426 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 STACQ99469 402 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SLC35A5Q9BS91 424 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 BTBD2Q9BX70 525 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TMEM120AQ9BXJ8 343 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 OR51I1Q9H343 314 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 ZNF385DQ9H6B1 395 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SLC52A3Q9NQ40 469 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 BATF3Q9NR55 127 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 DUSP22Q9NRW4 184 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 GIN1Q9NXP7 522 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 CCDC167Q9P0B6 97 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 SPRR3Q9UBC9 169 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 PCDHGB4Q9UN71 923 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 FAF1Q9UNN5 650 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 PRRC2CQ9Y520 2896 aaKnown RBP8.84□□□□□ -0.99
HDAC3-208ENST00000476739 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
HDAC3-208ENST00000476739 TRGV5A0A0B4J1U4 118 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 A0A1B0GVC2 190 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 FAM234BA2RU67 622 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 PRAMEF27A3QJZ7 478 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 CCDC154A6NI56 674 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 NPIPA2E9PIF3 369 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 NPIPA3F8WFD2 350 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 TRAPPC6AO75865 159 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 OXSR1O95747 527 aaPredicted RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 LDLRP01130 860 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 HPNP05981 417 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 TPOP07202 933 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 VIMP08670 466 aaKnown RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 OR12D1P0DN82 309 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 ABOP16442 354 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 PTGS2P35354 604 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 RBPJQ06330 500 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 STX5Q13190 355 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms