RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 K7ERI5 159 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 NDUFS8O00217 210 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 DUSP11O75319 330 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 UPK3AO75631 287 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 CAVIN2O95810 425 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 KRT6AP02538 564 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 FTH1P02794 183 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ALPLP05186 524 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 RPLP0P05388 317 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 FHP07954 510 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LIFP15018 202 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 C4BPBP20851 252 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 HMGB2P26583 209 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 CD1BP29016 333 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 MAT2AP31153 395 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 HNRNPH3P31942 346 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 CEACAM8P31997 349 aaPredicted RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 CDKN1BP46527 198 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SLC11A1P49279 550 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 BCAP31P51572 246 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ART1P52961 327 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ATP1B3P54709 279 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 HADHBP55084 474 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 PEX3P56589 373 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 NTHL1P78549 312 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 RBBP4Q09028 425 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SYCP1Q15431 976 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 HAGHQ16775 308 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 WLSQ5T9L3 541 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 AGBL2Q5U5Z8 902 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 C9orf57Q5W0N0 161 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 BHLHB9Q6PI77 547 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 C16orf82Q7Z2V1 217 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 GPR142Q7Z601 462 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 TSEN54Q7Z6J9 526 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 PIGZQ86VD9 579 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 DND1Q8IYX4 353 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 NAGSQ8N159 534 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ALLCQ8N6M5 410 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 OR51G2Q8NGK0 314 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 OR1L3Q8NH93 324 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 OR1F12Q8NHA8 337 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 APOBEC4Q8WW27 367 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LIPHQ8WWY8 451 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SORCS1Q8WY21 1168 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ART4Q93070 314 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LHX4Q969G2 390 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 EFHD2Q96C19 240 aaPredicted RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 C10orf35Q96D05 121 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SCRN2Q96FV2 425 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LURAP1Q96LR2 239 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF354BQ96LW1 612 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 DUX5Q96PT3 197 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 DPH7Q9BTV6 452 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SLC25A51Q9H1U9 297 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 BLZF1Q9H2G9 400 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LRRN3Q9H3W5 708 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 GPN2Q9H9Y4 310 aaPredicted RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 SLC17A5Q9NRA2 495 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 AGPAT3Q9NRZ7 376 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 STARD5Q9NSY2 213 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 PSMC3IPQ9P2W1 217 aaPredicted RBP3.65□□□□□ -1.83
VPS13D-207ENST00000476169 TUBGCP4Q9UGJ1 667 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF639Q9UID6 485 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 PITPNC1Q9UKF7 332 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 ALG6Q9Y672 507 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 UACAQ9BZF9 1416 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PPIAL4EA0A075B759 164 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 FBLL1A6NHQ2 334 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PRAC2D3DTV9 90 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 NEDD8-MDP1E9PL57 170 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CYB561D2O14569 222 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 RANBP6O60518 1105 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PPP1R3DO95685 299 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ANGPTL1O95841 491 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ECDO95905 644 aaPredicted RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 IGSF6O95976 241 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PPIAL4FP0DN26 164 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TBXA2RP21731 343 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CD9P21926 228 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 UCP1P25874 307 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 OR3A2P47893 321 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CDH6P55285 790 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 IL9RQ01113 521 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 BDH1Q02338 343 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 RGS1Q08116 209 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PEX6Q13608 980 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ENPP2Q13822 863 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SLC17A1Q14916 467 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ATXN7L3Q14CW9 347 aaPredicted RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TGFBIQ15582 683 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 UBE2V2Q15819 145 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CHRNA6Q15825 494 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 HIKESHIQ53FT3 197 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 NADSYN1Q6IA69 706 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ACSM5Q6NUN0 579 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms