RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 BAIAP2L1Q9UHR4 511 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DKKL1Q9UK85 242 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 PACSIN3Q9UKS6 424 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GRID1Q9ULK0 1009 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 OR10H1Q9Y4A9 318 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DNAJC15Q9Y5T4 150 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 NINQ8N4C6 2090 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 MED13LQ71F56 2210 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 IGLV3-32A0A0A0MS00 114 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 OR2M5A3KFT3 312 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SH3D21A4FU49 640 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CCDC151A5D8V7 595 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 TMEM233B4DJY2 109 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 MSTNO14793 375 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SEC22BO75396 215 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 TNFRSF21O75509 655 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 AQP8O94778 261 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 UTS2O95399 124 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 MYL2P10916 166 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CPA3P15088 417 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 HK1P19367 917 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 EFNA1P20827 205 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PRPH2P23942 346 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 ARRB2P32121 409 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CCKARP32238 428 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GCKP35557 465 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SLC6A8P48029 635 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PSPHP78330 225 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PRR5P85299 388 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SLC18A2Q05940 514 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF155Q12901 538 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 STX5Q13190 355 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 KEAP1Q14145 624 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PON3Q15166 354 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GRAMD1BQ3KR37 738 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 RFTN2Q52LD8 501 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 EXOSC6Q5RKV6 272 aaKnown RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GALNT10Q86SR1 603 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GGNQ86UU5 652 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GRAMD2AQ8IUY3 354 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 UBQLNLQ8IYU4 475 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CEP112Q8N8E3 955 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF610Q8N9Z0 462 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SLC16A11Q8NCK7 471 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 OR4K17Q8NGC6 315 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 FAM76AQ8TAV0 307 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 FNDC9Q8TBE3 224 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 FAM110BQ8TC76 370 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 EPS8L3Q8TE67 593 aaKnown RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 ZDHHC16Q969W1 377 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 CCDC126Q96EE4 140 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 LRRC46Q96FV0 321 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PGM2Q96G03 612 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 C16orf58Q96GQ5 468 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 MARK4Q96L34 752 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 FCRL1Q96LA6 429 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PIGQQ9BRB3 760 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GATA5Q9BWX5 397 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PINK1Q9BXM7 581 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 RNF122Q9H9V4 155 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 GIMAP4Q9NUV9 329 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 FAM120CQ9NX05 1096 aaKnown RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 KLHL28Q9NXS3 571 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 C6orf203Q9P0P8 240 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SENP1Q9P0U3 644 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 NTMQ9P121 344 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 PPP4R1LQ9P1A2 415 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 ABCG2Q9UNQ0 655 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 STK38LQ9Y2H1 464 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 WBP11Q9Y2W2 641 aaKnown RBP6.32□□□□□ -1.4
HDAC3-207ENST00000475549 TESMINQ9Y4I5 508 aa6.32□□□□□ -1.4
HDAC3-207ENST00000475549 SLC22A20A6NK97 555 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SEC14L5O43304 696 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CTIFO43310 598 aaKnown RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 EMC8O43402 210 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 AKAP10O43572 662 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 EFNA2O43921 213 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 GMFGO60234 142 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 COQ9O75208 318 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 GLRA3O75311 464 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SMNDC1O75940 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SLITRK5O94991 958 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 NKX2-2O95096 273 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 ANGPTL1O95841 491 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 OPN1LWP04000 364 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CRHP06850 196 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 THBDP07204 575 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 LINC00032P0C843 101 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 UROSP10746 265 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 ACP2P11117 423 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PRPS2P11908 318 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PEPDP12955 493 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 FOSL1P15407 271 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SDC1P18827 310 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 KRT4P19013 534 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 IL11P20809 199 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 LOXP28300 417 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms