RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 OMA1Q96E52 524 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 HSPBAP1Q96EW2 488 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 RMND5BQ96G75 393 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ITCHQ96J02 903 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 C5orf34Q96MH7 638 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 OR7D2Q96RA2 312 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NODALQ96S42 347 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CPPED1Q9BRF8 314 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 UTP23Q9BRU9 249 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SLC39A3Q9BRY0 314 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ACTRT3Q9BYD9 372 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NSRP1Q9H0G5 558 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PIGUQ9H490 435 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 TPT1P8Q9HAU6 139 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 C3orf14Q9HBI5 128 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 DUSP22Q9NRW4 184 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 GIN1Q9NXP7 522 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 KCNE5Q9UJ90 142 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CNOT11Q9UKZ1 510 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SLC5A6Q9Y289 635 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 B3GNT3Q9Y2A9 372 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NDUFAF1Q9Y375 327 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PCDHGA10Q9Y5H3 936 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 DOCK7Q96N67 2140 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 TRAV17A0A0B4J275 112 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CENPVL1A0A0U1RR11 272 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 DYTNA2CJ06 578 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OR6C70A6NIJ9 312 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 A8MVJ9 347 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 NPIPB9F8W1W9 429 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CLIC1O00299 241 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CDK2AP1O14519 115 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 FADS1O60427 444 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 FCMRO60667 390 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 DPM1O60762 260 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC22O60826 627 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ICOSLGO75144 302 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 REM1O75628 298 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 IL33O95760 270 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SP1P08047 785 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OR12D1P0DN82 309 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 T-ENOLP0DO92 83 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 BMP2P12643 396 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 COX4I1P13073 169 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CYP4B1P13584 511 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ETFAP13804 333 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 NAGAP17050 411 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 MATN1P21941 496 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 GZMMP51124 257 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 PMP22Q01453 160 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OC90Q02509 493 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 LRRC74AQ0VAA2 488 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CAPRIN1Q14444 709 aaKnown RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF169Q14929 603 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 RUNDC3AQ59EK9 446 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF766Q5HY98 468 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 COQ5Q5HYK3 327 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 FAM91A1Q658Y4 838 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 REP15Q6BDI9 236 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SLC25A25Q6KCM7 469 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 C8orf82Q6P1X6 216 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OPN5Q6U736 354 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 GALNTL5Q7Z4T8 443 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SULF2Q8IWU5 870 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 TAGAPQ8N103 731 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ANKFN1Q8N957 763 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 GOLM1Q8NBJ4 401 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 PSD4Q8NDX1 1056 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CHDHQ8NE62 594 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OR4C3Q8NH37 302 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SLC22A8Q8TCC7 542 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SPPL2AQ8TCT8 520 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 GRHL3Q8TE85 626 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 DIO2Q92813 273 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 PNPLA2Q96AD5 504 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 MOAP1Q96BY2 351 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 RCN3Q96D15 328 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SLC35G5Q96KT7 338 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SGCZQ96LD1 299 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ANKRD27Q96NW4 1050 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 STACQ99469 402 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 SDF2Q99470 211 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CGREF1Q99674 301 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 BARD1Q99728 777 aaKnown RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 KLHDC3Q9BQ90 382 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 BTBD2Q9BX70 525 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 OR51I1Q9H343 314 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 RMND5AQ9H871 391 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 IL1RL2Q9HB29 575 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 ARL8BQ9NVJ2 186 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 HPF1Q9NWY4 346 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 GMPR2Q9P2T1 348 aaKnown RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 LEF1Q9UJU2 399 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-204ENST00000474665 CBLCQ9ULV8 474 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 PCDHGB4Q9UN71 923 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms