RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SLC41A3Q96GZ6 507 aa20.25■□□□□ 0.83
CCM2-206ENST00000474617 IRAK4Q9NWZ3 460 aa20.25■□□□□ 0.83
CCM2-206ENST00000474617 PRODH2Q9UF12 536 aa20.25■□□□□ 0.83
CCM2-206ENST00000474617 SUSD2Q9UGT4 822 aa20.25■□□□□ 0.83
CCM2-206ENST00000474617 CHST2Q9Y4C5 530 aa20.25■□□□□ 0.83
CCM2-206ENST00000474617 MN1Q10571 1320 aaPredicted RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 CDHR4A6H8M9 788 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 TOX3O15405 576 aaPredicted RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 PNLIPP16233 465 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 GABRA3P34903 492 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 TRHRP34981 398 aaPredicted RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 GIPRP48546 466 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 PPM1FP49593 454 aaPredicted RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 ARL4DP49703 201 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 DCTN2Q13561 401 aaKnown RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 IRF3Q14653 427 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 CCDC81Q6ZN84 652 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 PRSS42Q7Z5A4 293 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 CLIP4Q8N3C7 705 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 ZG16BQ96DA0 208 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 SLC38A2Q96QD8 506 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 MED17Q9NVC6 651 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 HEMK1Q9Y5R4 338 aaPredicted RBP20.24■□□□□ 0.83
CCM2-206ENST00000474617 RNF215Q9Y6U7 377 aa20.24■□□□□ 0.83
CCM2-206ENST00000474617 CEP192Q8TEP8 1941 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 IGHV1OR21-1A0A087WYE8 117 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 IGHV5-51A0A0C4DH38 117 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 S1PR1P21453 382 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 BCKDHBP21953 392 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 PCYT1AP49585 367 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCM2-206ENST00000474617 ST3GAL4Q11206 333 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 NCF4Q15080 339 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 GPR68Q15743 365 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 MFSD4BQ5TF39 518 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 PLAG1Q6DJT9 500 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 SLC27A4Q6P1M0 643 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 ZNF613Q6PF04 617 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 WDR74Q6RFH5 385 aaPredicted RBP20.23■□□□□ 0.83
CCM2-206ENST00000474617 SLC16A12Q6ZSM3 486 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 CYP4Z2PQ8N1L4 340 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 B3GNT7Q8NFL0 401 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 SH3GL3Q99963 347 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 ZNF559Q9BR84 538 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 DUSP23Q9BVJ7 150 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 ALOXE3Q9BYJ1 711 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 LIN28AQ9H9Z2 209 aaKnown RBP20.23■□□□□ 0.83
CCM2-206ENST00000474617 FOLH1BQ9HBA9 442 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 Q9N2J8 555 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 TMEM5Q9Y2B1 443 aa20.23■□□□□ 0.83
CCM2-206ENST00000474617 A0A1W2PPW3 197 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 CPSF4LA6NMK7 179 aaKnown RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 DYRK3O43781 588 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 TP53P04637 393 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 MAP2K4P45985 399 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 SERPINB10P48595 397 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 FUT7Q11130 342 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 CTF1Q16619 201 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 RPL13AP3Q6NVV1 102 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 OLIG3Q7RTU3 272 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 GDF7Q7Z4P5 450 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 SLC43A2Q8N370 569 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 MMABQ96EY8 250 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 PEX11GQ96HA9 241 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 HS6ST2Q96MM7 605 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 VSTM2LQ96N03 204 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 NAA50Q9GZZ1 169 aaKnown RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 SEMA4GQ9NTN9 838 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 HCN3Q9P1Z3 774 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 AASSQ9UDR5 926 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 CFL2Q9Y281 166 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 GPR55Q9Y2T6 319 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 TNRC18O15417 2968 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 BCAS1O75363 584 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 KCNK2O95069 426 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 CT62P0C5K7 136 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 TNNI3P19429 210 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 FUT4P22083 530 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 OMPP47874 163 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 ZNF136P52737 540 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 GFERP55789 205 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 D2HGDHQ8N465 521 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 DCUN1D5Q9BTE7 237 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 C11orf16Q9NQ32 467 aa20.22■□□□□ 0.83
CCM2-206ENST00000474617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.22■□□□□ 0.83
CCM2-206ENST00000474617 YKT6O15498 198 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 TPST2O60704 377 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 CDK4P11802 303 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 DRD5P21918 477 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 EMDP50402 254 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 TUBA1BP68363 451 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 GINS1Q14691 196 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 EXOSC7Q15024 291 aaKnown RBP20.21■□□□□ 0.83
CCM2-206ENST00000474617 TIMM50Q3ZCQ8 353 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 FLYWCH1Q4VC44 716 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 MRPL2Q5T653 305 aaKnown RBP20.21■□□□□ 0.83
CCM2-206ENST00000474617 TMEM236Q5W0B7 351 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 TUBA1AQ71U36 451 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 WDR53Q7Z5U6 358 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms