RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 HBA1P69905 142 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 POU6F2P78424 691 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 ADORA2A-AS1P86434 159 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 DUSP5Q16690 384 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 FIGNL1Q6PIW4 674 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 NCCRP1Q6ZVX7 275 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 ACAD11Q709F0 780 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 WDSUB1Q8N9V3 476 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 OR8J2Q8NGG1 315 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 OR5AK3PQ8NH89 298 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 TESCQ96BS2 214 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 GIMAP5Q96F15 307 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 G6PC3Q9BUM1 346 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 BTBD2Q9BX70 525 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 AIG1Q9NVV5 245 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 FAM120CQ9NX05 1096 aaKnown RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 HRH3Q9Y5N1 445 aa12.96□□□□□ -0.33
VAMP4-203ENST00000474047 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 NUP214P35658 2090 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-203ENST00000474047 PRSS51A0A1B0GVH4 220 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 E9PBE3 544 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 ADAM10O14672 748 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 HOXD4P09016 255 aaPredicted RBP12.96□□□□□ -0.34
VAMP4-203ENST00000474047 IDO1P14902 403 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 UFM1P61960 85 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 PMPCAQ10713 525 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 FAM174BQ3ZCQ3 159 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 EMC4Q5J8M3 183 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 CDC73Q6P1J9 531 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 MARCH3Q86UD3 253 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 ANKRD46Q86W74 232 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 CLECL1Q8IZS7 167 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 PSMA8Q8TAA3 256 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 CA5BP1Q8WTZ4 195 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 RND1Q92730 232 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 CDS1Q92903 461 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.34
VAMP4-203ENST00000474047 SDCCAG3Q96C92 435 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 STACQ99469 402 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 DSN1Q9H410 356 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 PIGUQ9H490 435 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 PTGES2Q9H7Z7 377 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 TAS2R10Q9NYW0 307 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 FLRT3Q9NZU0 649 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 CAMK2AQ9UQM7 478 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.34
VAMP4-203ENST00000474047 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
VAMP4-203ENST00000474047 FADS1O60427 444 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 KCNK2O95069 426 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 ALDOCP09972 364 aaKnown RBP12.95□□□□□ -0.34
VAMP4-203ENST00000474047 AGAP20933 346 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 ENDOUP21128 410 aaKnown RBP12.95□□□□□ -0.34
VAMP4-203ENST00000474047 TCEA1P23193 301 aaKnown RBP12.95□□□□□ -0.34
VAMP4-203ENST00000474047 ART3Q13508 389 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 SF3B4Q15427 424 aaKnown RBP eCLIP12.95□□□□□ -0.343e-6■■■□□ 15.4
VAMP4-203ENST00000474047 GRAMD1BQ3KR37 738 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 SPANXN4Q5MJ08 99 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 IFNEQ86WN2 208 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 PM20D2Q8IYS1 436 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 ACTRT2Q8TDY3 377 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 HOXB13Q92826 284 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-203ENST00000474047 NTNG2Q96CW9 530 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 TIMP4Q99727 224 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 HHATLQ9HCP6 504 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 DUSP22Q9NRW4 184 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 COL12A1Q99715 3063 aa12.95□□□□□ -0.34
VAMP4-203ENST00000474047 RNF103-CHMP3A0A140T963 221 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 ANKRD28O15084 1053 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 UBDO15205 165 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 IGKV1D-16P01601 117 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 BMP7P18075 431 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 MATN1P21941 496 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 DPP4P27487 766 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 COL8A1P27658 744 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 SRD5A2P31213 254 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 MAP3K8P41279 467 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 C17orf67Q0P5P2 114 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 DOPEY1Q5JWR5 2465 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 CCNJQ5T5M9 372 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 ENPP6Q6UWR7 440 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 C6orf120Q7Z4R8 191 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 ASB5Q8WWX0 329 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 MARK4Q96L34 752 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 OR52E6Q96RD3 313 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 GIN1Q9NXP7 522 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 MED11Q9P086 117 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 FBXL2Q9UKC9 423 aa12.94□□□□□ -0.34
VAMP4-203ENST00000474047 DUXAA6NLW8 204 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms