RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C1QL3Q5VWW1 255 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 MTFR2Q6P444 385 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 MSANTD1Q6ZTZ1 278 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 TRILQ7L0X0 811 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 PLCZ1Q86YW0 608 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 CLEC4FQ8N1N0 589 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 OR4K17Q8NGC6 315 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 CDS1Q92903 461 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 SARAFQ96BY9 339 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 OR7D2Q96RA2 312 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 C15orf41Q9Y2V0 281 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 NPIPA2E9PIF3 369 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 NPIPA3F8WFD2 350 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 CCL21O00585 134 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 BCKDKO14874 412 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 IGHG3P01860 377 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 PTGDSP41222 190 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 TRPC1P48995 793 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 MRPL19P49406 292 aaKnown RBP12.56□□□□□ -0.4
USF1-205ENST00000473969 KHKP50053 298 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 ARFIP2P53365 341 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
USF1-205ENST00000473969 STX5Q13190 355 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 TIGD2Q4W5G0 525 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 AGKQ53H12 422 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 C6orf10Q5SRN2 563 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 DCST2Q5T1A1 773 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 CCNJQ5T5M9 372 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 WLSQ5T9L3 541 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 C16orf62Q7Z3J2 963 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 GALNT10Q86SR1 603 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 ZNF527Q8NB42 609 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 OR9I1Q8NGQ6 314 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 GOT1L1Q8NHS2 421 aaPredicted RBP12.56□□□□□ -0.4
USF1-205ENST00000473969 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 FAM110BQ8TC76 370 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 XAGE5Q8WWM1 108 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 TMEM120AQ9BXJ8 343 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 HOXD1Q9GZZ0 328 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 OR51I1Q9H343 314 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 MRGBPQ9NV56 204 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 TMEM45AQ9NWC5 275 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 CCDC167Q9P0B6 97 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 DKKL1Q9UK85 242 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 ACAD8Q9UKU7 415 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 ZNF835Q9Y2P0 537 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
USF1-205ENST00000473969 C15orf38-AP3S2A0A0A6YYH1 394 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 H3BNH8 94 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 NR5A2O00482 541 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 AQP7O14520 342 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 NDUFB5O43674 189 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 FADS1O60427 444 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 SEMA7AO75326 666 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 IGKV1D-16P01601 117 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 GSNP06396 782 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 CELA3AP09093 270 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 PTPN6P29350 595 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 CA7P43166 264 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 RPS26P62854 115 aaKnown RBP12.55□□□□□ -0.4
USF1-205ENST00000473969 HPCAP84074 193 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 C17orf67Q0P5P2 114 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 C3AR1Q16581 482 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 GRAMD1BQ3KR37 738 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 FLYWCH1Q4VC44 716 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 METTL21CQ5VZV1 264 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 SAXO2Q658L1 398 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 OR5M10Q6IEU7 315 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 TNFAIP8L2Q6P589 184 aaPredicted RBP12.55□□□□□ -0.4
USF1-205ENST00000473969 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
USF1-205ENST00000473969 MARCH3Q86UD3 253 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 OR5D16Q8NGK9 328 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 OR14L1PQ8NHC6 308 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 NEIL3Q8TAT5 605 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 FAM57AQ8TBR7 257 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 SSC4DQ8WTU2 575 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 RELTQ969Z4 430 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 VPS33AQ96AX1 596 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 NEURL3Q96EH8 262 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 INPP5KQ9BT40 448 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
USF1-205ENST00000473969 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
USF1-205ENST00000473969 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 STX11O75558 287 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
USF1-205ENST00000473969 ANGPTL1O95841 491 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 HPNP05981 417 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 NGFRP08138 427 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 OR12D1P0DN82 309 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 TBXA2RP21731 343 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 CASP9P55211 416 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms