RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KRTCAP3Q53RY4 240 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 PAGE3Q5JUK9 113 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 BNC2Q6ZN30 1099 aaPredicted RBP11.36□□□□□ -0.59
DDX56-209ENST00000473924 FAM109AQ8N4B1 249 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TMEM251Q8N6I4 163 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 FAM110BQ8TC76 370 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ZFP90Q8TF47 636 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TSPEARQ8WU66 669 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 RAB8BQ92930 207 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TMEM41AQ96HV5 264 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 GPR137Q96N19 417 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 PAIP1Q9H074 479 aaKnown RBP11.36□□□□□ -0.59
DDX56-209ENST00000473924 DEFB127Q9H1M4 99 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TPT1P8Q9HAU6 139 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 SLC52A3Q9NQ40 469 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 SDHAF3Q9NRP4 125 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 SLC6A13Q9NSD5 602 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 FBXO34Q9NWN3 711 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 FLRT3Q9NZU0 649 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ABCG2Q9UNQ0 655 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 PCDHB14Q9Y5E9 798 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 WIF1Q9Y5W5 379 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 LRRC3CA6NJW4 275 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 SCDO00767 359 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 FADS1O60427 444 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 SNX3O60493 162 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 GLSO94925 669 aaPredicted RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 CBX6O95503 412 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 GDF1P27539 372 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 PTGDSP41222 190 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 TDGF1P3P51864 188 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 HPCAP84074 193 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 RBPJQ06330 500 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 KLF10Q13118 480 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 STX5Q13190 355 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 MRPL49Q13405 166 aaKnown RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 MAPRE2Q15555 327 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 HYAL4Q2M3T9 481 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 ARHGAP11BQ3KRB8 267 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 MMEL1Q495T6 779 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDX56-209ENST00000473924 MARCH3Q86UD3 253 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 SIAH3Q8IW03 269 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 GHDCQ8N2G8 530 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 ZNF527Q8NB42 609 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 CHDHQ8NE62 594 aaPredicted RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 OR52N2Q8NGI0 321 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 OR4C3Q8NH37 302 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 DTNBP1Q96EV8 351 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 AURKBQ96GD4 344 aaPredicted RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 NMUR2Q9GZQ4 415 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 HOXD1Q9GZZ0 328 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 LDAHQ9H6V9 325 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 UBQLN4Q9NRR5 601 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 FAM53CQ9NYF3 392 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 PPP4R1LQ9P1A2 415 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.35□□□□□ -0.59
DDX56-209ENST00000473924 CAPN7Q9Y6W3 813 aa11.35□□□□□ -0.59
DDX56-209ENST00000473924 NINQ8N4C6 2090 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 CLIC1O00299 241 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 HMGN4O00479 90 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 SNPHO15079 494 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 STX11O75558 287 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 CBR3O75828 277 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 TRAPPC6AO75865 159 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 PDE9AO76083 593 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 OXSR1O95747 527 aaPredicted RBP11.34□□□□□ -0.59
DDX56-209ENST00000473924 C1QCP02747 245 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 TBXA2RP21731 343 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 GNLYP22749 145 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 PPIBP23284 216 aaKnown RBP11.34□□□□□ -0.59
DDX56-209ENST00000473924 PTPN6P29350 595 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ADSLP30566 484 aaPredicted RBP11.34□□□□□ -0.59
DDX56-209ENST00000473924 MAGEA8P43361 318 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 NFYCQ13952 458 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 GPR68Q15743 365 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 CMPK2Q5EBM0 449 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 COX20Q5RI15 118 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 LRIF1Q5T3J3 769 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 TIGD3Q6B0B8 471 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 OR5M10Q6IEU7 315 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ZAR1Q86SH2 424 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 PLCZ1Q86YW0 608 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ZNF614Q8N883 585 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 OR4K17Q8NGC6 315 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ROPN1LQ96C74 230 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 SDF2Q99470 211 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 EXO5Q9H790 373 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ZNF703Q9H7S9 590 aaPredicted RBP11.34□□□□□ -0.59
DDX56-209ENST00000473924 ZDHHC11Q9H8X9 412 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms