RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CLK3P49761 638 aaKnown RBP13.82□□□□□ -0.2
VTI1A-203ENST00000472892 CLDN15P56746 228 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GANABQ14697 944 aaKnown RBP13.82□□□□□ -0.2
VTI1A-203ENST00000472892 PCLAFQ15004 111 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 RFTN2Q52LD8 501 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-203ENST00000472892 KANK2Q63ZY3 851 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 MARCH3Q86UD3 253 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GRAMD2AQ8IUY3 354 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 HOMEZQ8IX15 550 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 OR2T11Q8NH01 316 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GFM2Q969S9 779 aaKnown RBP13.82□□□□□ -0.2
VTI1A-203ENST00000472892 DACH2Q96NX9 599 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 CCT7Q99832 543 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 REEP4Q9H6H4 257 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 PTGES2Q9H7Z7 377 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 C3orf14Q9HBI5 128 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GALNT8Q9NY28 637 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 NTMQ9P121 344 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 ZNF337Q9Y3M9 751 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 DNAJC15Q9Y5T4 150 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 IGLV3-32A0A0A0MS00 114 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 GXYLT2A0PJZ3 443 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 SDC1P18827 310 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 DNASE1P24855 282 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 FRKP42685 505 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 SUCLG1P53597 346 aaKnown RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 EEFSECP57772 596 aaKnown RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 PRR5P85299 388 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 C17orf67Q0P5P2 114 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 HSPB3Q12988 150 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 UGT3A2Q3SY77 523 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 ANKRD26P1Q6NSI1 321 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 CHMP1BQ7LBR1 199 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 LUZP2Q86TE4 346 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 GCNT2Q8N0V5 402 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 CIDECQ96AQ7 238 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 TMUB1Q9BVT8 246 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
VTI1A-203ENST00000472892 MKS1Q9NXB0 559 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 ITPR3Q14573 2671 aa13.81□□□□□ -0.2
VTI1A-203ENST00000472892 HRNRQ86YZ3 2850 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 MPDZO75970 2070 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 A0A1W2PNV4 684 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 SLC22A20A6NK97 555 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 LSM1O15116 133 aaKnown RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PDPK1O15530 556 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 AKAP10O43572 662 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 TNFRSF21O75509 655 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 NKX2-2O95096 273 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 KCNH1O95259 989 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 UTS2O95399 124 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 CHEK2O96017 543 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 IGKV1D-16P01601 117 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 LINC00032P0C843 101 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 NEFHP12036 1026 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 CPA2P48052 419 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 RFX3P48380 749 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PCYT1AP49585 367 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 DIO3P55073 304 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 STX5Q13190 355 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PDE7AQ13946 482 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 ZNF385BQ569K4 471 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 RAET1LQ5VY80 246 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 APOOLQ6UXV4 268 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 CAMKMTQ7Z624 323 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 MEIOBQ8N635 442 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 CEP70Q8NHQ1 597 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 GPR151Q8TDV0 419 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PIK3R3Q92569 461 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PPCDCQ96CD2 204 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 MBD6Q96DN6 1003 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 STARD4Q96DR4 205 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 C1GALT1C1Q96EU7 318 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 GIMAP5Q96F15 307 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 ZBED6CLQ96FA7 236 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 TSSK3Q96PN8 268 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PLEKHF2Q9H8W4 249 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 ACSS1Q9NUB1 689 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-203ENST00000472892 BAIAP2L1Q9UHR4 511 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PLEKHA6Q9Y2H5 1048 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 AKAP6Q13023 2319 aa13.8□□□□□ -0.2
VTI1A-203ENST00000472892 PRRC2AP48634 2157 aaKnown RBP13.79□□□□□ -0.2
VTI1A-203ENST00000472892 TLDC2A0PJX2 215 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 OR2M5A3KFT3 312 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 H0YC42 278 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 MSTNO14793 375 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 NPHS1O60500 1241 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 ANGPTL1O95841 491 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 NGFRP08138 427 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 ALDH3A1P30838 453 aa13.79□□□□□ -0.2
VTI1A-203ENST00000472892 GPC1P35052 558 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms