RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	EEF1A1P5	Q5VTE0	462 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	KANK2	Q63ZY3	851 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	RNF165	Q6ZSG1	346 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	SZRD1	Q7Z422	152 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	LUZP2	Q86TE4	346 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	C10orf107	Q8IVU9	208 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	UBQLNL	Q8IYU4	475 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	GCNT2	Q8N0V5	402 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	MEIOB	Q8N635	442 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	FADS6	Q8N9I5	356 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	CHDH	Q8NE62	594 aa	Predicted RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	OR2M3	Q8NG83	312 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	GFM2	Q969S9	779 aa	Known RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	INTS12	Q96CB8	462 aa	Known RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	PPCDC	Q96CD2	204 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	ELP4	Q96EB1	424 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	ZBED6CL	Q96FA7	236 aa	Predicted RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	ZNF764	Q96H86	408 aa	Predicted RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	APOPT1	Q96IL0	206 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	MS4A4E	Q96PG1	132 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	PIGQ	Q9BRB3	760 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	YIPF4	Q9BSR8	244 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	LMF2	Q9BU23	707 aa	Known RBP	8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	G6PC3	Q9BUM1	346 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	TBL1XR1	Q9BZK7	514 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	PIGM	Q9H3S5	423 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	DSN1	Q9H410	356 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	EQTN	Q9NQ60	294 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	MKS1	Q9NXB0	559 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	JKAMP	Q9P055	326 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	ST6GALNAC2	Q9UJ37	374 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	PACSIN3	Q9UKS6	424 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	TMED5	Q9Y3A6	229 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	CCL27	Q9Y4X3	112 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	PTGDR2	Q9Y5Y4	395 aa		8.08	□□□□□ -1.12
CHEK2-223	ENST00000472807	TLDC2	A0PJX2	215 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	FAM221A	A4D161	298 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	C17orf51	A8MQB3	221 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	AKAP10	O43572	662 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	HCRTR2	O43614	444 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	FADS1	O60427	444 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	ZIC3	O60481	467 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	TRIM13	O60858	407 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	UTS2	O95399	124 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CRH	P06850	196 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	LINC00032	P0C843	101 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	PRPS2	P11908	318 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	PEPD	P12955	493 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	SDC1	P18827	310 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	HK1	P19367	917 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	GABRA3	P34903	492 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	ASMT	P46597	345 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	IST1	P53990	364 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	MANF	P55145	182 aa	Known RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	B3GALT5-AS1	P59052	145 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	IFFO1	Q0D2I5	559 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	KIAA0040	Q15053	153 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	GALNTL6	Q49A17	601 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	OR2A2	Q6IF42	318 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	ANKRD26P1	Q6NSI1	321 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	PLXDC2	Q6UX71	529 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	ZNF551	Q7Z340	670 aa	Predicted RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CDC20B	Q86Y33	519 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	DDIAS	Q8IXT1	998 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	RIBC1	Q8N443	379 aa	Predicted RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CEP70	Q8NHQ1	597 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CLHC1	Q8NHS4	586 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	LINC01560	Q8TB33	94 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	GPR151	Q8TDV0	419 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CIDEC	Q96AQ7	238 aa	Predicted RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	C1GALT1C1	Q96EU7	318 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	EGLN2	Q96KS0	407 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	TSSK3	Q96PN8	268 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	FOXC2	Q99958	501 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	GATA5	Q9BWX5	397 aa	Predicted RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	REEP4	Q9H6H4	257 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	L2HGDH	Q9H9P8	463 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	EML4	Q9HC35	981 aa	Known RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	HHATL	Q9HCP6	504 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	CCM2L	Q9NUG4	571 aa	Predicted RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	GALNT8	Q9NY28	637 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	FLRT3	Q9NZU0	649 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	MED11	Q9P086	117 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	SH3BP4	Q9P0V3	963 aa		8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807	PRRC2A	P48634	2157 aa	Known RBP	8.07	□□□□□ -1.12
CHEK2-223	ENST00000472807		A0A1W2PNV4	684 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	GXYLT2	A0PJZ3	443 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	TMEM114	B3SHH9	223 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807		B4DXG7	233 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807		H3BML4	177 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	LSM1	O15116	133 aa	Known RBP	8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	SEC14L5	O43304	696 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	NPHS1	O60500	1241 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	TBX19	O60806	448 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	SMNDC1	O75940	238 aa	Known RBP eCLIP	8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	ANGPTL1	O95841	491 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	NUDT17	P0C025	328 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	MAPK1	P28482	360 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	HPCAL1	P37235	193 aa		8.06	□□□□□ -1.12
CHEK2-223	ENST00000472807	PRKAG1	P54619	331 aa		8.06	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms