RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	GMPPB	Q9Y5P6	360 aa		2.88	□□□□□ -1.95
PTCD3-209	ENST00000472044	AP4B1	Q9Y6B7	739 aa		2.88	□□□□□ -1.95
PTCD3-209	ENST00000472044	SMAD5-AS1	Q9Y6J3	95 aa		2.88	□□□□□ -1.95
PTCD3-209	ENST00000472044	LRRC30	A6NM36	301 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044		K7EPI3	171 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	PHOX2A	O14813	284 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC2A10	O95528	541 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	DIRAS3	O95661	229 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	TNNI3	P19429	210 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	PAICS	P22234	425 aa	Known RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	FAS	P25445	335 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	HTR2A	P28223	471 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	CDH5	P33151	784 aa	Predicted RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	CYLC1	P35663	651 aa	Predicted RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	MAGEA9	P43362	315 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	XCR1	P46094	333 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC25A1	P53007	311 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	NAPA	P54920	295 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	CXCL6	P80162	114 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC10A1	Q14973	349 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	MEDAG	Q5VYS4	303 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	AFTPH	Q6ULP2	937 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	CBLN3	Q6UW01	205 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	CENPU	Q71F23	418 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	GPD1L	Q8N335	351 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	GPR137C	Q8N3F9	429 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZBTB44	Q8NCP5	570 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	MRAP	Q8TCY5	172 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	TADA1	Q96BN2	335 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	UPRT	Q96BW1	309 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	C16orf45	Q96MC5	204 aa	Predicted RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SIGLEC12	Q96PQ1	595 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	VPS35	Q96QK1	796 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC30A2	Q9BRI3	323 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	PAXX	Q9BUH6	204 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	ELOVL4	Q9GZR5	314 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC25A51	Q9H1U9	297 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	RWDD1	Q9H446	243 aa	Predicted RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	LIN28A	Q9H9Z2	209 aa	Known RBP	2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC7A10	Q9NS82	523 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	DPM3	Q9P2X0	92 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	B9D1	Q9UPM9	204 aa		2.87	□□□□□ -1.95
PTCD3-209	ENST00000472044	RAI1	Q7Z5J4	1906 aa	Predicted RBP	2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	SDHD	O14521	159 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	CASK	O14936	926 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	GPAA1	O43292	621 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	NUDT21	O43809	227 aa	Known RBP	2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TRIM3	O75382	744 aa	Predicted RBP	2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	DUSP14	O95147	198 aa	Known RBP	2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	AK1	P00568	194 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	PTMA	P06454	111 aa	Known RBP	2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	IDS	P22304	550 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	IGHV1-2	P23083	117 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	CYP2F1	P24903	491 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	ACVR1B	P36896	505 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	MEOX2	P50222	304 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	ERVPABLB-1	P60509	514 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	OSTN	P61366	133 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	PUDP	Q08623	228 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	DPYSL3	Q14195	570 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TRIP10	Q15642	601 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	LINC01620	Q4KN68	170 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	HSP90AA5P	Q58FG0	334 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TMEM41B	Q5BJD5	291 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLX4IP	Q5VYV7	408 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	HSD11B1L	Q7Z5J1	315 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	C9orf40	Q8IXQ3	194 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	BPIFB2	Q8N4F0	458 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TEX9	Q8N6V9	391 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	ADAMTS16	Q8TE57	1224 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TBC1D31	Q96DN5	1066 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	HPDL	Q96IR7	371 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	OR5M11	Q96RB7	305 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	DPH7	Q9BTV6	452 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	TM2D1	Q9BX74	207 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	COQ10B	Q9H8M1	238 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	WDR76	Q9H967	626 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	RSPH14	Q9UHP6	348 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	CYTH4	Q9UIA0	394 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	CHMP2B	Q9UQN3	213 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	MFHAS1	Q9Y4C4	1052 aa		2.86	□□□□□ -1.95
PTCD3-209	ENST00000472044	ADAMTS9	Q9P2N4	1935 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044		A0A1B0GWJ7	208 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	FAM168B	A1KXE4	195 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZSCAN5B	A6NJL1	495 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	JAK2	O60674	1132 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	OPN1LW	P04000	364 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	GIG44	P09565	113 aa	Predicted RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	XRCC1	P18887	633 aa	Predicted RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	KIF5B	P33176	963 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	RPL4	P36578	427 aa	Known RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	MDH2	P40926	338 aa	Known RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	ACAA2	P42765	397 aa	Known RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	RND3	P61587	244 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	PLOD1	Q02809	727 aa	Predicted RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	ASAH1	Q13510	395 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	PAN3	Q58A45	887 aa	Known RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	MARC1	Q5VT66	337 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC22A10	Q63ZE4	541 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZNF57	Q68EA5	555 aa	Predicted RBP	2.85	□□□□□ -1.95

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