RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMEM102Q8N9M5 508 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 POGLUT1Q8NBL1 392 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 OR2T12Q8NG77 320 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 OR10Q1Q8NGQ4 319 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ADAMTS15Q8TE58 950 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 GRHL3Q8TE85 626 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 EFHD2Q96C19 240 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ASB9Q96DX5 294 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 OMA1Q96E52 524 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 HSPBAP1Q96EW2 488 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 THOC3Q96J01 351 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 C7orf34Q96L11 122 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ART5Q96L15 291 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 IP6K3Q96PC2 410 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 NPAS1Q99742 590 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ING2Q9H160 280 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 PRORYQ9H606 182 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 DCAF13Q9NV06 445 aaKnown RBP9.08□□□□□ -0.96
SF3A1-207ENST00000471342 OLAHQ9NV23 265 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ACTR3BQ9P1U1 418 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 MKLN1Q9UL63 735 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 PCDHGA10Q9Y5H3 936 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 NPFFR2Q9Y5X5 522 aa9.08□□□□□ -0.96
SF3A1-207ENST00000471342 ANKRD11Q6UB99 2663 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 A0A0G2JMM0 328 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 A0A1W2PPB8 328 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 A0A1W2PRS3 328 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 PINLYPA6NC86 204 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 OR6C70A6NIJ9 312 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 DUXAA6NLW8 204 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 KIR3DP1A8MWS1 328 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 EVPLLA8MZ36 301 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 CXCR6O00574 342 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 FFAR1O14842 300 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ICOSLGO75144 302 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ITGA10O75578 1167 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ME2P23368 584 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 MST1P26927 711 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 CD96P40200 585 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ACAA2P42765 397 aaKnown RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 KCNJ5P48544 419 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 KHKP50053 298 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ACTR3P61158 418 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 TRAP1Q12931 704 aaKnown RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 TBR1Q16650 682 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 DEFB109BQ30KR1 87 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 REEP3Q6NUK4 255 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 JMJD6Q6NYC1 403 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 BHLHB9Q6PI77 547 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ENPP6Q6UWR7 440 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 CBLL1Q75N03 491 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 IFNEQ86WN2 208 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 VRK2Q86Y07 508 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 RBM45Q8IUH3 476 aaKnown RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SLC34A3Q8N130 599 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 BEST3Q8N1M1 668 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 GALNT16Q8N428 558 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SLC15A4Q8N697 577 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 PAPD5Q8NDF8 572 aaKnown RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 HIPK4Q8NE63 616 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 OR10G3Q8NGC4 313 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 GPR151Q8TDV0 419 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 PAQR8Q8TEZ7 354 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SLC39A7Q92504 469 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 TTC9Q92623 222 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 KIAA1143Q96AT1 154 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ARSGQ96EG1 525 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 GAL3ST4Q96RP7 486 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ADOQ96SZ5 270 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SH3GL1Q99961 368 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ECSITQ9BQ95 431 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 LHPPQ9H008 270 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 RLIMQ9NVW2 624 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 FAF1Q9UNN5 650 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-207ENST00000471342 LIPT1Q9Y234 373 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
SF3A1-207ENST00000471342 A0A0G2JPF8 293 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 HNRNPCL2B2RXH8 293 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 HNRNPCL3B7ZW38 293 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 ALG1L2C9J202 215 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 PPM1BO75688 479 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 UTS2O95399 124 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 OXSR1O95747 527 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 WDPCPO95876 746 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 LGI1O95970 557 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 OPN1SWP03999 348 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 C8BP07358 591 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 PABPC4LP0CB38 370 aaKnown RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 HNRNPCL4P0DMR1 293 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 CCL3P10147 92 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 ICAM2P13598 275 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 ETS2P15036 469 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 TNFRSF1BP20333 461 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 TBXA2RP21731 343 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms