RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FAM124BQ9H5Z6 455 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 NTN4Q9HB63 628 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 IL1RAPL2Q9NP60 686 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 NANSQ9NR45 359 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FAM114A2Q9NRY5 505 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SPRR3Q9UBC9 169 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 COPS7AQ9UBW8 275 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF223Q9UK11 482 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 NAP1L2Q9ULW6 460 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FZR1Q9UM11 496 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 EXOSC1Q9Y3B2 195 aaKnown RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 PPIAL4AQ9Y536 164 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FKBP7Q9Y680 259 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 USP6P35125 1406 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IGKV2-28A0A075B6P5 120 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IGHV1OR15-1A0A075B7D0 117 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TRBV6-6A0A0A6YYG2 114 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IGHV7-81A0A0B4J1V7 117 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 A0A0J9YXY3 114 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SMIM28A0A1B0GU29 152 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 LRRD1A4D1F6 860 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TUBAL3A6NHL2 446 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 FBLL1A6NHQ2 334 aaKnown RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SAGE2PA6NJ88 616 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM110-MUSTN1A8MSY1 372 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 ANKRD63C9JTQ0 380 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 E9PLD3 99 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 K7ENP7 123 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TLR4O00206 839 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TM9SF1O15321 606 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 RAMP1O60894 148 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 NPIPB7O75200 414 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SCRG1O75711 98 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 STK17BO94768 372 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SUPT7LO94864 414 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TGDSO95455 350 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 JCHAINP01591 159 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IGKV2D-28P01615 120 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 OR8U8P0C7N1 319 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IGLL1P15814 213 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CCNA2P20248 432 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 HTR1EP28566 365 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CD1BP29016 333 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 AXLP30530 894 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 HTR1FP30939 366 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 UGT1A5P35504 534 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MAGEA4P43358 317 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TNNT3P45378 269 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CASP9P55211 416 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 NUP107P57740 925 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PFN3P60673 137 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 IL9RQ01113 521 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 GALK2Q01415 458 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PLOD1Q02809 727 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 ZP4Q12836 540 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 NME3Q13232 169 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PDE7AQ13946 482 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 DPYSL3Q14195 570 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 BTG3Q14201 252 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 KCNJ11Q14654 390 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 C16orf72Q14CZ0 275 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 AANATQ16613 207 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 KCTD19Q17RG1 926 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 ACSF3Q4G176 576 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SLC39A12Q504Y0 691 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TEX44Q53QW1 395 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 BEND6Q5SZJ8 279 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 LIPKQ5VXJ0 399 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SLX4IPQ5VYV7 408 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 LEG1Q6P5S2 330 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM110Q86TL2 294 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 YRDCQ86U90 279 aaKnown RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF410Q86VK4 478 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CCDC36Q8IYA8 594 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PEX5LQ8IYB4 626 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF786Q8N393 782 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 C20orf203Q8NBC4 194 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MARCH1Q8TCQ1 289 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 BLOC1S5Q8TDH9 187 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MYDGFQ969H8 173 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TADA1Q96BN2 335 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 C5orf30Q96GV9 206 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 VPS39Q96JC1 886 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MBOAT4Q96T53 435 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 NRTNQ99748 197 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 TXN2Q99757 166 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CHRDL1Q9BU40 450 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MMADHCQ9H3L0 296 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 NXF3Q9H4D5 531 aaKnown RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 MMP26Q9NRE1 261 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 DUS2Q9NX74 493 aaKnown RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CD274Q9NZQ7 290 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 OR1A1Q9P1Q5 309 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 DUSP12Q9UNI6 340 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PSG11Q9UQ72 335 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 SCML2Q9UQR0 700 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 CDH10Q9Y6N8 788 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 GRIN2DO15399 1336 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PIKFYVEQ9Y2I7 2098 aa0.82□□□□□ -2.28
UBXN4-207ENST00000471246 PLEKHG1Q9ULL1 1385 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms