RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ZNF474Q6S9Z5 364 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 APOOLQ6UXV4 268 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF551Q7Z340 670 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 GSPT2Q8IYD1 628 aaKnown RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 PIK3R3Q92569 461 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 FAM111AQ96PZ2 611 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 PINK1Q9BXM7 581 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 OPN3Q9H1Y3 402 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 KLHL28Q9NXS3 571 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 C6orf203Q9P0P8 240 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 MRTO4Q9UKD2 239 aaKnown RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 EIF3LQ9Y262 564 aaKnown RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 PTGDR2Q9Y5Y4 395 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 SETD2Q9BYW2 2564 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 INTS1Q8N201 2190 aaKnown RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 OR2M5A3KFT3 312 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 SHISA8B8ZZ34 492 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 H3BML4 177 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 SEC14L5O43304 696 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 PLIN3O60664 434 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 RSL1D1O76021 490 aaKnown RBP11.97□□□□□ -0.49
CPSF4-210ENST00000469897 SLITRK5O94991 958 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 GOSR1O95249 250 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 UTS2O95399 124 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 ANGPTL1O95841 491 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 IGKV1D-16P01601 117 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 CPA3P15088 417 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 FOSL1P15407 271 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 PSMD4P55036 377 aaKnown RBP11.97□□□□□ -0.49
CPSF4-210ENST00000469897 C17orf67Q0P5P2 114 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 CCDC153Q494R4 210 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 FRMD7Q6ZUT3 714 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF610Q8N9Z0 462 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 SMPDL3BQ92485 455 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF845Q96IR2 970 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-210ENST00000469897 SMR3AQ99954 134 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 LMF2Q9BU23 707 aaKnown RBP11.97□□□□□ -0.49
CPSF4-210ENST00000469897 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 OXSMQ9NWU1 459 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 FAM120CQ9NX05 1096 aaKnown RBP11.97□□□□□ -0.49
CPSF4-210ENST00000469897 BAIAP2L1Q9UHR4 511 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 ABCG2Q9UNQ0 655 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 NINQ8N4C6 2090 aa11.97□□□□□ -0.49
CPSF4-210ENST00000469897 PRRC2AP48634 2157 aaKnown RBP11.96□□□□□ -0.49
CPSF4-210ENST00000469897 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 H3BQF6 201 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 LINC01387J3KSC0 135 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 SLC28A1O00337 649 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 AKAP10O43572 662 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 KCNH1O95259 989 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 CGAP01215 116 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 PRPS2P11908 318 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 CRHR1P34998 444 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 CD79BP40259 229 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 KCNJ5P48544 419 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 NAA20P61599 178 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
CPSF4-210ENST00000469897 HSPB3Q12988 150 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 SGCBQ16585 318 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 GRAMD1BQ3KR37 738 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 ANKRD34AQ69YU3 496 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 Q6ZSR9 355 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 IKBIPQ70UQ0 350 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 GALNT10Q86SR1 603 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 OR4C3Q8NH37 302 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 FNDC9Q8TBE3 224 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 GPR151Q8TDV0 419 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 CIDECQ96AQ7 238 aaPredicted RBP11.96□□□□□ -0.49
CPSF4-210ENST00000469897 C1GALT1C1Q96EU7 318 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 PIGQQ9BRB3 760 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 SLC39A3Q9BRY0 314 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 TBL1XR1Q9BZK7 514 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 RNF122Q9H9V4 155 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 C3orf14Q9HBI5 128 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 LRTM1Q9HBL6 345 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 FIS1Q9Y3D6 152 aa11.96□□□□□ -0.49
CPSF4-210ENST00000469897 KIAA1549Q9HCM3 1950 aa11.96□□□□□ -0.5
CPSF4-210ENST00000469897 KIF2AO00139 706 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 COPEO14579 308 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 EMC8O43402 210 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 RGS14O43566 566 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 OPN1LWP04000 364 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 LINC00032P0C843 101 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 POU2F1P14859 743 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 GPC1P35052 558 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 UGT2B10P36537 528 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 MANFP55145 182 aaKnown RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 PRR5P85299 388 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 GANABQ14697 944 aaKnown RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 PON3Q15166 354 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 GLYR1Q49A26 553 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 RFTN2Q52LD8 501 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF385BQ569K4 471 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 C22orf34Q6ZV56 151 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms