RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SLC41A3Q96GZ6 507 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 TM9SF2Q99805 663 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 FBXO34Q9NWN3 711 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 PCOLCE2Q9UKZ9 415 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 SLC7A7Q9UM01 511 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 SSR3Q9UNL2 185 aa13.7□□□□□ -0.22
CBWD3-205ENST00000469687 AP3D1O14617 1153 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 PRG2P13727 222 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 NDUFV2P19404 249 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 FUT1P19526 365 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 RORCP51449 518 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 TPTEP56180 551 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 C3orf38Q5JPI3 329 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 CCBE1Q6UXH8 406 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 GDPGP1Q6ZNW5 385 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 LHFPL3Q86UP9 236 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 CELF2-AS1Q8N7Q2 184 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 POGLUT1Q8NBL1 392 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 OR4F15Q8NGB8 312 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ACOT11Q8WXI4 607 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ITPKCQ96DU7 683 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 SERINC2Q96SA4 455 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 S1PR5Q9H228 398 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 TOR4AQ9NXH8 423 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 KLHL28Q9NXS3 571 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ACTR10Q9NZ32 417 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 NTMQ9P121 344 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 MUTYHQ9UIF7 546 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 V9GYH0 126 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 KDM4EB2RXH2 506 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 B3GALT2O43825 422 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 PTTG1O95997 202 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 LALBAP00709 142 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 GKN3PP0CG01 181 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 LIMS3P0CW19 117 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 LIMS4P0CW20 117 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 CPMP14384 443 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 AZGP1P25311 298 aaKnown RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 IFNGR2P38484 337 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF136P52737 540 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 RAB40BQ12829 278 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 SELENBP1Q13228 472 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 MINDY4Q4G0A6 757 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 KLHL22Q53GT1 634 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 FAM3CQ92520 227 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 PIK3R3Q92569 461 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 MRPL38Q96DV4 380 aaKnown RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 SDF2Q99470 211 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 TCEAL2Q9H3H9 227 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 FGF20Q9NP95 211 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 ADAP2Q9NPF8 381 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 MRPS18AQ9NVS2 196 aaKnown RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 CRNNQ9UBG3 495 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-205ENST00000469687 PILRAQ9UKJ1 303 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 CSNK1G3Q9Y6M4 447 aa13.69□□□□□ -0.22
CBWD3-205ENST00000469687 LRRC72A6NJI9 287 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 DUXAA6NLW8 204 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 H3BQ06 376 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SURF4O15260 269 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 KLF4O43474 513 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 FGF17O60258 216 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 CELA2BP08218 269 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 HOXC4P09017 264 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 HNRNPA2B1P22626 353 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 FPR3P25089 353 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SRP54P61011 504 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 PPP1CAP62136 330 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 HNRNPA0Q13151 305 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 KIR2DS3Q14952 304 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF79Q15937 498 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 DECR1Q16698 335 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ARHGAP11BQ3KRB8 267 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF628Q5EBL2 1059 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 B3GLCTQ6Y288 498 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF761Q86XN6 746 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SLC38A2Q96QD8 506 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 PHF11Q9UIL8 331 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 KCNE5Q9UJ90 142 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 NCKAP1Q9Y2A7 1128 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SF3B6Q9Y3B4 125 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 H0YGG7 62 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 PEX12O00623 359 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 TNFSF14O43557 240 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 HCRTR1O43613 425 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 TPMTP51580 245 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 CDH11P55287 796 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ARF3P61204 181 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 EEF1A1P68104 462 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 PSPHP78330 225 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 BNC1Q01954 994 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms