RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CCNYL1Q8N7R7 359 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 C9orf43Q8TAL5 461 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 UBTD2Q8WUN7 234 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 GBP5Q96PP8 586 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 OR1F2PQ96R84 312 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 SIGLEC11Q96RL6 698 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PARD6BQ9BYG5 372 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PRSS22Q9GZN4 317 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 CTDSP1Q9GZU7 261 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PRORYQ9H606 182 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 NT5DC2Q9H857 520 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PLAC1Q9HBJ0 212 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 Q9N2J8 555 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 MS4A12Q9NXJ0 267 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 C3orf18Q9UK00 162 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 PTBP2Q9UKA9 531 aaKnown RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 SLC22A7Q9Y694 548 aa5.82□□□□□ -1.48
PTCD3-208ENST00000469585 V9GYY5 206 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-208ENST00000469585 TPRP12270 2363 aaKnown RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 KIF26BQ2KJY2 2108 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 PCM1Q15154 2024 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 A0A0A6YYC8 382 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NSG1A0A0A6YYJ2 146 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 DYTNA2CJ06 578 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 I3L1I5 382 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 GOLGA8RI6L899 631 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TAF4O00268 1085 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 ERI3O43414 337 aaKnown RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 DPM1O60762 260 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 MYO1DO94832 1006 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NUDT17P0C025 328 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 C8orf89P0DMQ9 161 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 IL1RNP18510 177 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 MMP11P24347 488 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 RORAP35398 523 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SSR2P43308 183 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TSFMP43897 325 aaKnown RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 XCR1P46094 333 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 OR1D4P47884 311 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SLC6A12P48065 614 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 MTTPP55157 894 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 HERVK_113P63132 956 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 BTN3A2P78410 334 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 BIKQ13323 160 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 HKDC1Q2TB90 917 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 PRTGQ2VWP7 1150 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 DEFB134Q4QY38 66 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 LACTB2Q53H82 288 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TECRLQ5HYJ1 363 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 VWA5B1Q5TIE3 1220 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TMEM207Q6UWW9 146 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 DEF8Q6ZN54 512 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 FAM57BQ71RH2 274 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TIPARPQ7Z3E1 657 aaKnown RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 KLBQ86Z14 1044 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 PLD3Q8IV08 490 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 PRSS58Q8IYP2 241 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 TEX19Q8NA77 164 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 OR51Q1Q8NH59 317 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 FLVCR1-AS1Q8TAF5 88 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NT5CQ8TCD5 201 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SNRNP27Q8WVK2 155 aaKnown RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 KAT2AQ92830 837 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 RNFT2Q96EX2 444 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 OR2A5Q96R48 311 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SERINC2Q96SA4 455 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 ATOH8Q96SQ7 321 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SERPINI1Q99574 410 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SLC25A23Q9BV35 468 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NPLQ9BXD5 320 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-208ENST00000469585 ERVK-6Q9BXR3 956 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 ING2Q9H160 280 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 SLC26A1Q9H2B4 701 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 RHBGQ9H310 441 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 ANKZF1Q9H8Y5 726 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 GPR83Q9NYM4 423 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NKIRAS1Q9NYS0 192 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 PHF11Q9UIL8 331 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 NAALAD2Q9Y3Q0 740 aa5.81□□□□□ -1.48
PTCD3-208ENST00000469585 CEP295Q9C0D2 2601 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 CXorf65A6NEN9 183 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ARGFXA6NJG6 315 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAM90A7PA6NKC0 464 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAM90A22PA8MWA6 464 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAM90A12PA8MX19 464 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAM90A23PA8MXZ1 464 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 IDSB3KWA1 339 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SGK494L7N484 410 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 BMP10O95393 424 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 IFNA16P05015 189 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PRR35P0CG20 571 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 CPA3P15088 417 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 CCL11P51671 97 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ARFIP1P53367 373 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PGGT1BP53609 377 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PLA2G16P53816 162 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PKNOX1P55347 436 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 RAB8AP61006 207 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 RPS18P62269 152 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms